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Name : kdpB (RHA1_ro01231) Accession : YP_701213.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.4 Position : 1300317 - 1302422 bp Length : 2106 bp Strand : - Note : tc: 3.A.3 DNA sequence : GTGAGTGTGAACGTGACCAGTCGTCTGGAGAACGAGGCGGCGACCACGACGACCGATGCCGGCCACGACCCGGCGCCCGT GAAGGCGGGAATCTTCAGCCCCGCCCAGCTGGTGACGGCGCTACCGGGCGCCCTGCGCAAACTCGACCCCCGGCACCTCG CCCGCAACCCGGTGATGTTCGTGGTGTTCGTCGGCTCCGTCGTCACCACCGTCATGGCCGTCGCCGACCCGTCCGTGTTC TCCTGGGCCGTCGCCGCCTGGCTGTGGTTCACGGTGCTGTTCGCGAATCTGGCCGAGTCGGTCGCGGAAGGCCGGGGCAA GGCGCAGGCGGCGAGCCTGCGGAAGGTGAAGCAGGACACGGTCGCCCACCGGATCGCGGCGAGCGGCCGGGTGGAGTCGG TGGCGGGTACCGAACTCACCGTCGGCGACCGGGTGGTCGTCGAGGCGGGAGAGGTGATACCCGGCGACGGTGACGTCGTC GACGGCATTGCGACCGTGGACGAGTCGGCCATCACCGGCGAATCGGCGCCCGTCGTCCGCGAATCCGGTGGCGACCGGTG TGCCGTCACCGGTGGCACGACCGTGCTGTCCGACCGGATCGTCGTGCGCATCACCGCGGCCCCCGGACAGTCGTTCGTGG ACCGGATGATCGCCCTAGTGGAGGGGGCGGCGCGGCAGAAGACGCCGAACGAGATCGCGCTGAACATCCTGCTGGCGTCG CTGACGATCATCTTCCTGCTGGCCGTCGTCGCGATCGGCCCGATGGGCCTGTACGCGGGCCAGGAGCAGGATCCGATCAA GCTGATCGCGTTGCTGGTCTGCCTGATCCCCACCACGATCGGGGCCCTGCTGTCGGCCATCGGCATCGCCGGGATGGACC GACTGGTGCAGCGGAACGTCCTGGCGATGTCGGGGCGGGCGGTGGAGGCTGCCGGCGACATCGACACCCTGCTGATGGAC AAGACCGGCACCATCACGTTCGGCAACCGGCAGGCCACGGCCCTGCATCCCGCACCGGGGGTTTCCGCGATCGAGTTGGC CACGGCCGCACGGTTGTCCAGTCTCGCGGACGGCACGCCCGAGGGTCGCAGCATCGTGGACCTGTGCGCCCGCGACTTCG GGTTGGACCCCGCACCGTCCGAGGCGGAGAGAGCGGCGGAGTTCGTGCCGTTCACGGCGCAGACCCGGATGAGCGGACTC GACATCGACGGCGCCCGGATCCGCAAGGGCGCGAGCGACGCGGTGCTGACCTGGGTGCGGGCGCTCGGCGGACGCGCGGC GTCCGCGGTCACCGACAGCGTGAACCGGATCGCGCAGGCCGGGGGAACCCCGTTGGTGGTCGCCACCGTCCGCGGAGACG CAGCGACCGTCCTCGGCGTGATCGCGCTGTCGGACGTGGTGAAACCGGGTATCGCCGAGCGGTTCGCGGAACTGCGGGCC ATGGGGATTCGCACGGTGATGATCACCGGCGACAACCCGTTGACGGCGAAGGCCATCGCGGCCGAGGCCGGAGTCGACGA CTTCATGGCCGAGGCGACACCCGAGGACAAGCTCGCGCTGATCCGCAGAGAACAGGAGCGCGGCCGGCTCGTCGCGATGA CCGGGGACGGCACCAACGACGCCCCGGCGCTGGCCCAGGCGGATGTCGGGGTGGCGATGAACACCGGCACGTCCGCGGCG AAGGAAGCCGGGAACATGGTGGATCTCGATTCGGATCCCACCAAGCTCATCGAGGTGGTGGAGATCGGCAAGCAGCTTCT CATCACCCGCGGTGCGCTCACCACGTTCTCGCTCGCCAACGACCTGGCCAAGTACTTCGCGATTCTTCCCGCCCTGTTCA GCGGCATCTATCCGCAGCTGAACACGCTGAACATCATGCGGCTGGCCACCCCGGAATCCGCCATCCTGTCGGCGGTGATC TTCAACGCCGTGGTGATCGTCGCGCTGATCCCGTTGTCGCTGAAAGGCGTTCGCTACCGTCCGTCGTCGGCGTCGACGCT GCTGGGCCGCAACCTGCTGATCTACGGCCTCGGCGGTGTGATCACACCGTTCGCCGGTATCTGGCTCATCGACCTCGTCG TCCGTCTCGTTCCCGGAATTGGGTGA Protein sequence : MSVNVTSRLENEAATTTTDAGHDPAPVKAGIFSPAQLVTALPGALRKLDPRHLARNPVMFVVFVGSVVTTVMAVADPSVF SWAVAAWLWFTVLFANLAESVAEGRGKAQAASLRKVKQDTVAHRIAASGRVESVAGTELTVGDRVVVEAGEVIPGDGDVV DGIATVDESAITGESAPVVRESGGDRCAVTGGTTVLSDRIVVRITAAPGQSFVDRMIALVEGAARQKTPNEIALNILLAS LTIIFLLAVVAIGPMGLYAGQEQDPIKLIALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVEAAGDIDTLLMD KTGTITFGNRQATALHPAPGVSAIELATAARLSSLADGTPEGRSIVDLCARDFGLDPAPSEAERAAEFVPFTAQTRMSGL DIDGARIRKGASDAVLTWVRALGGRAASAVTDSVNRIAQAGGTPLVVATVRGDAATVLGVIALSDVVKPGIAERFAELRA MGIRTVMITGDNPLTAKAIAAEAGVDDFMAEATPEDKLALIRREQERGRLVAMTGDGTNDAPALAQADVGVAMNTGTSAA KEAGNMVDLDSDPTKLIEVVEIGKQLLITRGALTTFSLANDLAKYFAILPALFSGIYPQLNTLNIMRLATPESAILSAVI FNAVVIVALIPLSLKGVRYRPSSASTLLGRNLLIYGLGGVITPFAGIWLIDLVVRLVPGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-171 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-172 | 60 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-153 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 7e-154 | 54 |
