Gene Information

Name : glnA1 (RHA1_ro01157)
Accession : YP_701142.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : glutamate--ammonia ligase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1230751 - 1232187 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence :
GTGGCGTTCACCACGGCCGAAGAGGTCATCAAGTTCATCAAGGACGAGAACGTCGAATATGTCGACATCCGGTTCAGCGA
CCTGCCGGGCGTGCAGCAGCACTTCTCGATCCCGGCGTCCGCGTTCAACCAGGACGTCTTCGAGGACGGCCTCGCGTTCG
ACGGTTCGTCCGTCCGCGGCTTCCAGTCGATCCACGAGTCGGACATGATGCTCCTCCCCGACGTCGCCACCGCCCAGCTC
GACCCGTTCCGCGCGGCCAAGACGCTGAACATCAACTTCTTCGTGCACGACCCGTTCACGCGTGAGTCCTACAGCCGCGA
CCCGCGTAACGTCGCGCGCAAGGCCGAGGAATACCTGAAGTCGACCGGCATCGCCGACACCGCCTTCTTCGGCGCCGAGG
CCGAGTTCTACATCTTCGACTCGGTCCGCTACGACTCCGGCATCAACGGCGCGTTCTACGAGCTCGACTCCATCTCGGGT
TCCTGGAACACGGGCAACGACGTGAACGCCGACGGCAGCCCCAACCTGGGCTACAAGGTCCGCCCCAAGGGTGGATACTT
CCCCGTCGCTCCGTACGACCACTACGTCGACCTGCGCGACGAGATCTCCACCAACCTGCAGAACGCGGGCTTCGAGCTCG
AGCGCGGCCACCACGAGGTGGGCACCGGCGGCCAGCAGGAGATCAACTACAAGTTCAACACGCTGCTCGCGGCCGCGGAC
GACCTGCAGCTGTTCAAGTACATCGTGAAGAACACCGCCTGGCAGCACGGCAAGTCGGCCACCTTCATGCCGAAGCCGCT
GTTCGGCGACAACGGCTCGGGTATGCACGTCCACCAGTCGCTGTGGAAGGACGGCAAGCCGCTGTTCCACGACGAGGCCG
GCTACGCGGGTCTGTCCGACATGGCGCGTCACTACATCGGCGGCATCCTGCACCACGCACCGTCGCTGCTGGCGTTCACC
AACCCGACGATCAACTCGTACCACCGTCTGGTGCCGGGCTACGAAGCCCCCATCAACCTCGTGTACAGCCAGCGCAACCG
CTCGGCGGCCGTGCGTATCCCGATCACCGGCAACAACCCGAAGGCCAAGCGCCTCGAGTTCCGCGCCCCCGACTCCTCGG
GTAACCCCTACCTGAACTTCGCGGCGCAGATGATGGCCGGCCTGGACGGCATCAAGAACAAGATCGAGCCGCAGGCTCCC
GTCGACAAGGACCTCTACGAGCTCCCGCCGGAGGAGGCCCGCAACATCCCGCAGGCTCCCACCAGCCTGTCGGCCGTCAT
CGATCGCCTCGAGGCTGATCACGACTACCTCACCGAGGGTGGCGTGTTCACGTCCGACCTGATCGAGACGTGGATCTCGC
TGAAGCGTGAGCAGGAGATCGCTCCGGTCAACCTGCGTCCGCACCCCTACGAGTTCCAGCTGTACTACGACGTGTGA

Protein sequence :
MAFTTAEEVIKFIKDENVEYVDIRFSDLPGVQQHFSIPASAFNQDVFEDGLAFDGSSVRGFQSIHESDMMLLPDVATAQL
DPFRAAKTLNINFFVHDPFTRESYSRDPRNVARKAEEYLKSTGIADTAFFGAEAEFYIFDSVRYDSGINGAFYELDSISG
SWNTGNDVNADGSPNLGYKVRPKGGYFPVAPYDHYVDLRDEISTNLQNAGFELERGHHEVGTGGQQEINYKFNTLLAAAD
DLQLFKYIVKNTAWQHGKSATFMPKPLFGDNGSGMHVHQSLWKDGKPLFHDEAGYAGLSDMARHYIGGILHHAPSLLAFT
NPTINSYHRLVPGYEAPINLVYSQRNRSAAVRIPITGNNPKAKRLEFRAPDSSGNPYLNFAAQMMAGLDGIKNKIEPQAP
VDKDLYELPPEEARNIPQAPTSLSAVIDRLEADHDYLTEGGVFTSDLIETWISLKREQEIAPVNLRPHPYEFQLYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-95 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA1 YP_701142.1 glutamate--ammonia ligase VFG1399 Protein 0.0 81