Gene Information

Name : clpP (CPR_C0013)
Accession : YP_699942.1
Strain : Clostridium phage phiSM101
Genome accession: NC_008265
Putative virulence/resistance : Unknown
Product : putative endopeptidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : 3.4.21.-
Position : 13953 - 14684 bp
Length : 732 bp
Strand : -
Note : identified by match to protein family HMM PF00574

DNA sequence :
GTGGCAAAAGTAAATATAAAAGGTCCTATAATTTCAAGTGATGAAAAATGGATATATAATTGGTTTGGAATGGATGCAAC
ATGTGCTAGGGATGTTGAAAAAGTAATAAATTCAGTTCAACAAGGTGAACAATTGGAAGTTATAATCAATAGTAATGGTG
GTTATGTTGATGAAGGTTCTGAAATTTATACATTGTTAAAGGATTATAATGGTGAAGTTGTTATTAAAATAGTTGGAATG
GCAGCGAGTGCAGCAAGCGTTATTGCTATGGGTGGTGATAAAGTTAAAATTTCACCAACTGGAAGAATAATGATACATAA
TGCTGCTGGAGGAGTATGTGGAGATTACAGACAAATGGAGCATGGAGCAGAGGTTCTAAAAGATTGCAATGAAGCAATAG
CTAATGCTTATGCACTTAAAACTGGAATGAGTAAAGAAGAATTATTAGATTTAATGAATAAAGAAACATTTATGAATGCA
CAAAAAGCAAAACAATTAGGCTTTGTAGATGAAATTATGTTTGATAATTCGAATAGACTTGTTAATGATTTAAATTCTGG
AATGTTACCTAAGGATGTAATTGAAAAAATTAGGAATATGAAAGAAGAGGATTTAAAAAAAGAAAATAATGAAAATGAAA
AAAAAGAAATTAATTCATTAAAAGAAAAGCTAGTATTTAAGAATAAAAGTGTGACTAGCTTTTTATTATGTCAAAAAGAA
GGGATGTTATAA

Protein sequence :
MAKVNIKGPIISSDEKWIYNWFGMDATCARDVEKVINSVQQGEQLEVIINSNGGYVDEGSEIYTLLKDYNGEVVIKIVGM
AASAASVIAMGGDKVKISPTGRIMIHNAAGGVCGDYRQMEHGAEVLKDCNEAIANAYALKTGMSKEELLDLMNKETFMNA
QKAKQLGFVDEIMFDNSNRLVNDLNSGMLPKDVIEKIRNMKEEDLKKENNENEKKEINSLKEKLVFKNKSVTSFLLCQKE
GML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0824 YP_002746160.1 phage ClpP protease Not tested ¥ÕSeq2 Protein 7e-30 42
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-34 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 1e-34 42
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 1e-34 42
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 1e-34 42
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 1e-34 42
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 1e-34 42