Gene Information

Name : CPR_0781 (CPR_0781)
Accession : YP_698106.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate transport permease-like protein yusV
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 906141 - 906917 bp
Length : 777 bp
Strand : +
Note : similar to Bacillus subtilis; identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAATGATAAAAACAAATAATTTGAAATTGTGTTATGATGAAAAGATAATATTAGATGATATAAATATAGAAATAGA
AAAAGGGAAAATTACAGCATTAATTGGACCTAATGGTTGTGGTAAATCTACTTTAATAAAGTCTATATCTAAGATACTTA
CTCCTAAAAGTGGTGAAGTCTTAATGGGAGATAAAAATCTTCTTAAAATGCCACCAAAGGAATTAGCAAAGGAATTAGCT
ATGTTACCACAAAGTAGTAGTGCTCCAGAGGATTTAACTATTTATGATTTAGTTAAGCAGGGGAGATATCCTTATCATAA
CTTATTATCATTTTGGAGCAAAAAAGATGAGGAAATAGTAATGGAATCTATTAGAAAAATGGGACTAATAGAAGAAAAAG
ATAGGACTTTAGAAAATCTTTCTGGTGGACAAAGACAAAGAGCATGGATTGCCTTATCTTTATGTCAAGATACAGAAGTT
ATACTTTTAGATGAACCTACAAATCATTTAGATATAAAGTATCAGCTAGAGATTTTAAATATTTTAAAAGAGCTTAATAG
AAAAGAAAATAGAACTATAGTAATGGTAATTCATGATATAAATCATGCTTTAAGATATGCTGATAATATAATAGCTTTAA
AGGATGGAAATATATTTGCCCAAGGTAGCAAAGATAAAATTATAAATGAAGATCTTATTAAAAATGTTTTTGATATTAAA
TGTAGAATTATAGATTCACCAATTGATAATGGTAAGATGTGCGTAACTTATATATAA

Protein sequence : 
MKMIKTNNLKLCYDEKIILDDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDKNLLKMPPKELAKELA
MLPQSSSAPEDLTIYDLVKQGRYPYHNLLSFWSKKDEEIVMESIRKMGLIEEKDRTLENLSGGQRQRAWIALSLCQDTEV
ILLDEPTNHLDIKYQLEILNILKELNRKENRTIVMVIHDINHALRYADNIIALKDGNIFAQGSKDKIINEDLIKNVFDIK
CRIIDSPIDNGKMCVTYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-53 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-53 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-54 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-54 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-49 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-49 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-49 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPR_0781 YP_698106.1 iron(III) dicitrate transport permease-like protein yusV VFG0925 Protein 6e-56 41