Gene Information

Name : CPR_0772 (CPR_0772)
Accession : YP_698097.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Unknown
Product : ISCpe2, transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 899011 - 900162 bp
Length : 1152 bp
Strand : +
Note : identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766

DNA sequence :
ATGAGAAAGAAAGCATATAAATTTAGAATATACCCAACTAAGAAACAAGCCGAGCTAATTAACAAGACTATTGGATGTTG
TAGGTTTGTATTCAACTATTCTTTAGGTGTTCAAAAAACTAAAGATAATTATTGGAATATAGTTGAGGAGATGGTTCAAC
AAGGCTACTTCCAAGAGAATAATTGGAAAGGCGAGTTCTTTAATAAAGCCAATTCAATTAAAGATATAGCTAAATTAAAG
AAAAGCTATGATTGGCTTAAAGAAGTAGATAGCATAGCACTACAGGCTTCTGTTGAAAATCTTGGTGCTGGATATGATAA
GTATTACAAAAAAAAAGGTGGCAGACCTAAATTTAAGTCTAAGAAAAATGAAATACAATCTTATACTACTAAATTAGTAA
AAGCTAAAGGTAATGTAAATATTGAGATAGTAGGTAAAGGAATTAAACTACCTAAACTTGGATTAGTTAAGATAGAAAAT
TCAAGAAATATAGATGGAAATATTAAAAGAGTTACTGTGAACAGAACACAATCTGGTAAATATTTTGCATCTATTCTTTG
TGATGTAAATATTCAAGAATTACCTAAAATAGATAAAAAAGTTGGTGTAGATGTTGGACTAAAAACTTTTGCTGTTTGTT
CTGATGGATATGAAGAAGCTAATCCTAAACACTTTAGAAAGGCAGAAAAAAGACTTATTAAACTTCAAAGAGATTTAGCT
CGTAAAGAATATAACTCTAAAAACTATCACAAAAATAGAATTATGATTGCTAAATTACATGAAAGGATAGCAAATCAAAG
AATGGACTTCTTACAAAAATTTTCAACTAAGCTAATTAGAGAAAACCAATCAATAGCCATTGAAGATTTAAGAGTTTCAA
ATATGCTTAAAAACCACAAACTTGCTAAAGTAATTTCAGAAGCAAGTTGGTCAGAATTTAGAAGAATGCTAGAATATAAG
GCTGAATGGTATGGTAGAAAAATAGTAATTGCTCCACCAGACTATGCAAGCTCTCAACTATGTTCTGAATGTGGCTATAA
GAATATAGAAGTTAAAAACCTAGGTCTAAGAGAATGGGTATGTCCCGAATGTGGAACACACCAGCAAAGAGACCTTAATG
CTTCAATAAACTTGGAAAAGCTGATAGCTTAA

Protein sequence :
MRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKLK
KSYDWLKEVDSIALQASVENLGAGYDKYYKKKGGRPKFKSKKNEIQSYTTKLVKAKGNVNIEIVGKGIKLPKLGLVKIEN
SRNIDGNIKRVTVNRTQSGKYFASILCDVNIQELPKIDKKVGVDVGLKTFAVCSDGYEEANPKHFRKAEKRLIKLQRDLA
RKEYNSKNYHKNRIMIAKLHERIANQRMDFLQKFSTKLIRENQSIAIEDLRVSNMLKNHKLAKVISEASWSEFRRMLEYK
AEWYGRKIVIAPPDYASSQLCSECGYKNIEVKNLGLREWVCPECGTHQQRDLNASINLEKLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 3e-163 99