|
Name : CPR_0711 (CPR_0711) Accession : YP_698037.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : ISCpe2, transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 831194 - 832348 bp Length : 1155 bp Strand : + Note : identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766 DNA sequence : GTGATAAGAAAGAAAGCATATAAATTTAGAATATATCCAACTAAGAAACAAGCCGAGCTAATTAACAAGACTATTGGATG TTGTAGGTTTGTATTCAACTATTCTTTAGGTGTTCAAAAAACTAAAGATAATTATTGGAATATAGTTGAGGAGATGGTTC AACAAGGCTACTTCCAAGAGAATAATTGGAAAGGCGAGTTCTTTAATAAAGCCAATTCAATTAAAGATATAGCTAAATTA AAGAAAAGCTATGATTGGCTTAAAGAAGTAGATAGCATAGCACTACAGGCTTCTGTTGAAAATCTTGGTGCTGGATATGA TAAGTATTACAAAAAAACAGGTGGTAGACCTAAATTTAAGTCTAAGAAAAATGAAATACAATCTTATACTACTAAATTAG TAAAAGCTAAAGGTAATGTAAATATTGAGATAGTAGGTAAAAGAATTAAACTACCTAAACTTGGATTAGTTAAGATAAAA AATTCAAGAAATATAGATGGAAATATTAAAAGAGTTACTGTGAGCAGAACACAATCTGGTAAATATTTTGCATCTATTCT TTGTGATGTAAATATTCAAGAATTACCTAAAATAGATAAAAAAGTTGGTGTAGATGTTGGATTAAAAACTTTTGCTGTTT GTTCTGATGGATATGAAGAAGCTAATCCTAAACACTTTAGAAAGGCAGAAAAAAGACTTATTAAACTTCAAAGAGATTTA GCTCGTAAAGAATATAACTCTAAAAACTATCACAAAAATAGAATTATGATTGCTAAATTACATGAAAGGATAGCAAATCA AAGAATGGACTTCTTACAAAAATTTTCAACTAAGCTAATTAGAGAAAACCAATCAATAGCCATTGAAGATTTAAGAGTTT CAGATATGCTTAAAAACCACAAACTTGCTAAAGTAATTTCAGAAGCAAGTTGGTCAGAATTTAGAAGAATGCTAGAATAC AAGGCTGAATGGTATGGTAGAAAAATAGTAATTTCTCCATCAGACTATGCAAGCTCTCAACTATGTTCTGAATGTGGCTA TAAGAATATAGAAGTTAAAAACCTAGGTCTAAGAGAATGGGTATGTCCCGAATGTGGAACACACCATCAAAGAGACCTTA ATGCTTCAATAAACTTGGAAAAGCTGATAGCTTAA Protein sequence : MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKL KKSYDWLKEVDSIALQASVENLGAGYDKYYKKTGGRPKFKSKKNEIQSYTTKLVKAKGNVNIEIVGKRIKLPKLGLVKIK NSRNIDGNIKRVTVSRTQSGKYFASILCDVNIQELPKIDKKVGVDVGLKTFAVCSDGYEEANPKHFRKAEKRLIKLQRDL ARKEYNSKNYHKNRIMIAKLHERIANQRMDFLQKFSTKLIRENQSIAIEDLRVSDMLKNHKLAKVISEASWSEFRRMLEY KAEWYGRKIVISPSDYASSQLCSECGYKNIEVKNLGLREWVCPECGTHHQRDLNASINLEKLIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 4e-175 | 99 |
