|
Name : CPR_0679 (CPR_0679) Accession : YP_698005.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : ISCpe2, transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 800668 - 801822 bp Length : 1155 bp Strand : + Note : identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766 DNA sequence : GTGATAAGAAAGAAAGCATATAAATTTAGAATATATCCAACTAAGAAACAAGCCGAGCTAATTAACAAGACTATTGGATG TTGTAGGTTTGTATTCAACTATTCTTTAGGTGTTCAAAAAACTAAAGATAATTATTGGAATATAGTTGAGGAGATGGTTC AACAAGGCTACTTCCAAGAGAATAATTGGAAAGGCGAGTTCTTTAATAAAGCCAATTCAATTAAAGATATAGCTAAATTA AAGAAAAGCTATGATTGGCTTAAAGAAGTAGATAGCATAGCACTACAGGCTTCTGTTGAAAATCTTGGTGCTGGATATGA TAAGTATTACAAAAAAACAGGTGGCAGACCTAAATTTAAGTCTAAGAAAAATGAAATACAATCTTATACTACTAAATTGG TAAAAGCTAAAGGTAATGTAAATATTGAGATAGTAGGTAAAAGAATTAAACTACCTAAACTTGGATTAGTTAAGATAGAA AATTCAAGAAATGTAGATGGAGATATTAAAAGAGTTACTGTGAGCAGAACACAATCTGGTAAATATTTTGCATCTATTCT TTGTGATGTAAATATTGAAAAATTACCTAAAATAGATAAAAAAGTTGGTGTAGATGTTGGACTAAAAACTTTTGCTGTTT GTTCTGATGGATATGAAGAAGCTAATCCTAAACACTTTAGAAAGGCAGAAAAAAGACTTATTAAACTTCAAAGAGATTTA GCTCGTAAAGAATATAACTCTAAAAACTATCACAAAAATAGAATTATGATTGCTAAATTACATGAAAGGATAGCAAATCA AAGAATGGACTTCTTACAAAAATTTTCAACTAAGCTAATTAGAGAAAACCAATCAATAGCCATTGAAGATTTAAGAGTTT CAAATATGCTTAAAAACCATAAACTTGCTAAAGTAATTTCAGAAGCAAGTTGGTCAGAATTTAGAAGAATGCTAGAATAC AAGGCTGAATTGTATGGTAGAGAAATAGTAATTGCTCCACCAGACTATGCAAGCTCTCAACTATGTTCTGAATGTGGCTA TAAGAATATAGAAGTTAAAAATCTAGGTCTAAGAGAATGGGTATGTCCCGAATGTGGAACACACCATCAAAGAGACCTTA ATGCTTCAATAAACTTGAAAAAGCTGATAGCTTAA Protein sequence : MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKL KKSYDWLKEVDSIALQASVENLGAGYDKYYKKTGGRPKFKSKKNEIQSYTTKLVKAKGNVNIEIVGKRIKLPKLGLVKIE NSRNVDGDIKRVTVSRTQSGKYFASILCDVNIEKLPKIDKKVGVDVGLKTFAVCSDGYEEANPKHFRKAEKRLIKLQRDL ARKEYNSKNYHKNRIMIAKLHERIANQRMDFLQKFSTKLIRENQSIAIEDLRVSNMLKNHKLAKVISEASWSEFRRMLEY KAELYGREIVIAPPDYASSQLCSECGYKNIEVKNLGLREWVCPECGTHHQRDLNASINLKKLIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0626 | YP_697953.1 | ISCpe2, transposase orfB | Not tested | Not named | Protein | 2e-173 | 98 |
