|
Name : CPR_0648 (CPR_0648) Accession : YP_697974.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : IS1470, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 769950 - 771002 bp Length : 1053 bp Strand : + Note : identified by match to protein family HMM PF00665 DNA sequence : ATGGACTATCAAAATCATAACACAGAGTCAAGAAAAAATAAACACTTAAATATGAAAGAGCGTATGATAGTTGAAATACG TCTTAAAGATGGATTTTCAGCTTACAAAATAGCAAAAGAACTAAATAGGCCTATAAATACCGTTTTAAATGAAATACGCC GTGGTACTACTAAGCAAATTAAGCAAGGTAAGGAATTAAATATGTATTTTGCTGATACTGGTGAAGCTGTTTATAAGAAG AATCGCTTAAAATCTAGTCGTAAATACAAACTATTAGAATGTAGTGATTTTATAAAATATGTAGTTGATAAAGTTAAGAA TGATCACTGGTCTTTAGATGCGTGTGTTGGTGAAGCTCTGCATTCATCTAGATTTAGTCCTTCTCAAATTATTTCGACAA AAACGCTTTATAACTATGTAGACCTTGGCTTATTACCTATAAAAAATATAGATTTACCAGCTAAACTTCATAGAAATAAA AAGTCTACTAGAGTAAGAAATAATAAGAAAAAGCTTGGCACTAGCATTTCAGATCGTCCTAATTCTATTGAAAACCGTGA AGAATTTGGACATTGGGAAATAGACTGTGTATTAGGTGAAAAATCTAATAAAGATAAGGTTTTGTTAACACTTGTCGAGC GTAAAACTAGGTATGCTATAATATCTGAAATGCCTTCCCATTCAGCAATATCTGTTACACAGACTCTTGATAAGATTAAA GAATTTTTTGGCAGTAAATTTAGTGAAGTATTTAAGAGTATAACTGCTGATAATGGCTCTGAATTTGCTGATTTATCAGA ATTTGAACTAAAAACAAAAACTAAAGTGTATTTCACTCACCCATATTCTTCATTTGAAAAAGGTACAAATGAGCGTCATA ATGGACTGATTAGGCGTTTTATCCCGAAAGGAAAACGAATTTCAGATTACTCACTTGAAACTATATCTTTCATAGAAAAT TGGATGAATACTCTTCCTAGAAAGCTTCTTGATTACAAGACTCCAGAAGAATTATTTGAAATACACTTAGATGAAATATA TTCATTATATTAA Protein sequence : MDYQNHNTESRKNKHLNMKERMIVEIRLKDGFSAYKIAKELNRPINTVLNEIRRGTTKQIKQGKELNMYFADTGEAVYKK NRLKSSRKYKLLECSDFIKYVVDKVKNDHWSLDACVGEALHSSRFSPSQIISTKTLYNYVDLGLLPIKNIDLPAKLHRNK KSTRVRNNKKKLGTSISDRPNSIENREEFGHWEIDCVLGEKSNKDKVLLTLVERKTRYAIISEMPSHSAISVTQTLDKIK EFFGSKFSEVFKSITADNGSEFADLSEFELKTKTKVYFTHPYSSFEKGTNERHNGLIRRFIPKGKRISDYSLETISFIEN WMNTLPRKLLDYKTPEELFEIHLDEIYSLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-163 | 100 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-161 | 99 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-120 | 99 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-160 | 99 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-160 | 99 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-160 | 99 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 9e-159 | 98 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 7e-160 | 98 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-160 | 98 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-160 | 98 |
