Gene Information

Name : CPR_0382 (CPR_0382)
Accession : YP_697711.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Unknown
Product : IS1469, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 467148 - 467603 bp
Length : 456 bp
Strand : -
Note : identified by match to protein family HMM PF01797

DNA sequence :
ATGGATACAAACAGTTTAGCACATACAAAATGGAATTGTAAATATCATATAGTTTTTGCACCAAAACACAGAAGGAAAGA
AATATATGGAGAGAAAAAACAAGAAATAAGTGAGATATTAAGGCAGCTTTGTGAATGGAAAGGAGTTAGGATAGTCGAAG
CGCACGCTTGCGTAGATCACATACACATGCTTGTTGAAATACCACCTAAAATGAGTGTTTCAAGTTTCGTTTGGGTTCTA
AAATGTAAAAGTAGTCTTATGATTTTTGAGAAATTTGCAAATTTAAAATATAAATATGGAAATAGACATTTCTGGTGTAT
GGGATTTTACGTTGATACTGTCGGAAAAAATAAGAAGGCAATTGAAGACTATATAAGAAATCAAGAACAAGAAGATATGA
TAGCTGATCAAATAAGTTTAAAAGAATATATGGACACTTTTAAGTGTAGCAAGTAA

Protein sequence :
MDTNSLAHTKWNCKYHIVFAPKHRRKEIYGEKKQEISEILRQLCEWKGVRIVEAHACVDHIHMLVEIPPKMSVSSFVWVL
KCKSSLMIFEKFANLKYKYGNRHFWCMGFYVDTVGKNKKAIEDYIRNQEQEDMIADQISLKEYMDTFKCSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 4e-68 100
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-44 68
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 3e-44 66
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 9e-35 59
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-34 59