Gene Information

Name : CPR_0321 (CPR_0321)
Accession : YP_697650.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Unknown
Product : IS1470, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 382323 - 383375 bp
Length : 1053 bp
Strand : -
Note : identified by match to protein family HMM PF00665

DNA sequence :
ATGGACTATCAAAATCATAACACAGAGTCAAGAAAAAATAAACACTTAAATATGAAAGAGCGTATGATAGTTGAAATACG
TCTTAAAGATGGATTTTCAGCTTACAAAATAGCAAAAGAACTAAATAGGCCTATAAATACCGTTTTAAACGAAATACGCC
GTGGTACTACTAAGCAAATTAAGCAAGGTAAGGAATTTAATGTGTATTTTGCTGATACTGGTGAAGCTGTTTATAAGAAG
AATCGCTTAAAATCTAGTCGTAAATACAAACTATTAGAATGTAGTGATTTTATAAAATATGTAGTTGATAAAGTTAAGAA
TGATCACTGGTCTTTAGATGCGTGTGTTGGTGAAGCTCTGCATTCATCTAGATTTAGTCCTTCTCAAATTATTTCAACAA
AAACGCTTTATAACTATGTAGACCTTGGCTTATTACCTATAAAAAATATAGATTTACCAGCTAAACTTCATAGAAATAAA
AAGTCTACTAGAGTAAGAAATAATAAGAAAAAGCTTGGCACTAGCATTTCAGATCGTCCTAATTCTATTGAAAACCGTGA
AGAATTTGGACATTGGGAAATAGACTGTGTATTAGGTGAAAAATCTAATAAAGATAAGGTTTTGCTAACACTTGTCGAGC
GTAAAACTAGGTATGCTATAATATCTGAAATGCCTTCTCATTCAGCAATATCTGTTACAAAGACTCTTGATAAGATTAAA
GAATTTTTTGGCAGTAAATTTAGTGAAGTATTTAAGAGTATAACTGCTGATAATGGCTCTGAATTTGCTGATTTATCAGA
ATTTGAACTAAAAACAAAAACTAAAGTGTATTTCACTCACCCATATTCTTCATTTGAAAAAGGTACAAATGAGCGTCATA
ATGGACTGATTAGGCATTTTATCCCGAAAGGAAAACGAATTTCAGATTACTCACTTGAAACTATATCTTTCATAGAAAAT
TGGATGAATACTCTTCCTAGAAAGCTTCTTAATTACAAGACTCCAGAAGAATTATTTGAAATACACTTAGATGAAATATA
TTCATTATATTAA

Protein sequence :
MDYQNHNTESRKNKHLNMKERMIVEIRLKDGFSAYKIAKELNRPINTVLNEIRRGTTKQIKQGKEFNVYFADTGEAVYKK
NRLKSSRKYKLLECSDFIKYVVDKVKNDHWSLDACVGEALHSSRFSPSQIISTKTLYNYVDLGLLPIKNIDLPAKLHRNK
KSTRVRNNKKKLGTSISDRPNSIENREEFGHWEIDCVLGEKSNKDKVLLTLVERKTRYAIISEMPSHSAISVTKTLDKIK
EFFGSKFSEVFKSITADNGSEFADLSEFELKTKTKVYFTHPYSSFEKGTNERHNGLIRHFIPKGKRISDYSLETISFIEN
WMNTLPRKLLNYKTPEELFEIHLDEIYSLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 1e-162 100
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 1e-160 99
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 1e-161 99
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 1e-161 99
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 6e-162 99
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 1e-120 99
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 1e-160 98
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 6e-161 98
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 2e-159 98
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 2e-160 98