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Name : dnaB (CPR_2648) Accession : YP_699883.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2873164 - 2874483 bp Length : 1320 bp Strand : - Note : unwinds double stranded DNA DNA sequence : ATGAAGAGTTTGCCACAAAGTATAGAAGCGGAACAATCTGTTTTAGGGGCAATGATAATAGATAGAACAACCATAGCTCA AGCCGCTGAGGTTTTAAATAAGGATTCATTTTATAGAGATGCTCATAAGGTAATATTTCAAAGTATAATAGAAATGTACC AAAGAGATCAAGCTGTAGACCAATTAACTCTTTTAGAGTATTTAAAATCTACTGATAGACTTGAAAAAGCCGGTGGTATA AGTTATGTAACAGAAATAAGTGCATCTGTACTTAGTACAGTTAACATAAAATCATACATAAAAATAGTTGATGAAAAAGC TATGCTTAGAAGACTTATAAAATCCTCTACAGAAATTATAGAGGATTGTTATAACAATCAAGAAGATGTTGAAAAAGTTA TAGATTCAGCAGAGAAGAAAATATTTGATTTATCTGAAAAGAGATCATCAAATGATTTTGAGCCTTTAAGCGTTGTTCTT GAAAGAGGTTTTGAGCAAATAGAGGCTATATTTAATAATGAAGGGGAACTTACAGGTGTTGGTTCTGGATTTAAAGATTT GGATGAGATGACATCTGGATTCCAAAAAGGGGATATGGTGCTTATAGCAGCAAGACCATCTATGGGTAAAACAACCTTTG CTCTTAACATAGCAGAACATGCTGCTTTAAGAGAGGGAAAGAGTGTTGTTATATTCTCTTTGGAAATGTCAAAGGAACAG CTTGCATATAAGTTATTATGTTCAGAGGCTAATGTGGATATGTTAAGTCTTAGAACAGGTAAATTAACTCCTGAGGATTG GGACAATATAGCTAGAGCATCAGGCCCACTAGCATCAGCTAAGATATACATAGATGATACTGCTGGGGTTTCTGTAATGG AAATGAGATCTAAGTGTAGAAGATTAAAAATGGAATATGGAATAGATCTTATACTTATAGACTACTTACAACTTATGAGT GGAAGTGGTGAAAGTAGACAACAAGAGGTTGCGGAGATTTCAAGAAATATAAAAGCTATAGCTAAGGAAATGGAATGTCC AGTTATAGCCTTATCTCAGCTTTCTCGTGCTCCAGAGCAAAGAGCAGACCATAGACCTATGTTATCTGACCTTAGAGAAT CTGGATCAATAGAGCAGGATGCTGACCTTGTTATGTTCTTATATAGAGATGAGTACTATAACAAGGAAACAGAAGATAAA AATGTTGGAGAATGTATAATAGCTAAGCAGAGAAACGGTCCAGTTGGAACAGTTAAGCTTGCATGGCTAGGTCAATACAG TAAATTTGCAGATTATGAAGCTATTCATAAGGATGTTTAA Protein sequence : MKSLPQSIEAEQSVLGAMIIDRTTIAQAAEVLNKDSFYRDAHKVIFQSIIEMYQRDQAVDQLTLLEYLKSTDRLEKAGGI SYVTEISASVLSTVNIKSYIKIVDEKAMLRRLIKSSTEIIEDCYNNQEDVEKVIDSAEKKIFDLSEKRSSNDFEPLSVVL ERGFEQIEAIFNNEGELTGVGSGFKDLDEMTSGFQKGDMVLIAARPSMGKTTFALNIAEHAALREGKSVVIFSLEMSKEQ LAYKLLCSEANVDMLSLRTGKLTPEDWDNIARASGPLASAKIYIDDTAGVSVMEMRSKCRRLKMEYGIDLILIDYLQLMS GSGESRQQEVAEISRNIKAIAKEMECPVIALSQLSRAPEQRADHRPMLSDLRESGSIEQDADLVMFLYRDEYYNKETEDK NVGECIIAKQRNGPVGTVKLAWLGQYSKFADYEAIHKDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-82 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-72 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-72 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-74 | 41 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-77 | 41 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-77 | 41 |
