Gene Information

Name : fhuC (CPR_0214)
Accession : YP_697549.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 268264 - 269043 bp
Length : 780 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATTAGAGGAGAAAAATTATCATTCAATTACAAGGGAGAAAAAAATATCATTAATGATTTAAATATAGATATAAAAGA
GGGAGAAATAACAACTATTATTGGCCCTAATGGAAGTGGAAAATCAACTTTGCTAAGTCTATTATGTGCTTTAAATAAAA
GTAAAACTGGACATGTTTATTTGGGGGATATAAACATGAATAATCTTAAATATAAGAATATAGCAAAGATTTTAGCAACT
GTCCATCAACAAAATAGTGTGCCAAAGGATATAAAGGTTGAAGAACTTGTTGCCTATGGTAGATATCCTCATAAAGGATA
TTTTAAAAATAACAATAAGGAAGATAAAAACATAATTAAATGGGCTTTAGAATGTACAGGACTTGATGATTTAAAACATA
AGGGAGTTATGAATTTATCAGGGGGAGAAAGACAAAGAGCTTTTATATCAATGGCTTTAGCTCAAAAGCCTAAAATTTTA
TTTTTAGATGAGCCAACAACTTATTTAGATATTTTTCATCAAATAGAAATATTAGAGATTGTAAAAAAGTTAAATAAGGA
TAATGGGCTAACTGTTGTTATGGTTTTACATGATATAAATCAAGCAATTAAATATAGTCATAATATTGTTGTCATGAAAG
ATGGAAAGATTGTAAAAGAGGGAAAATCAGAGAATGTAATAGATGAAAATTTATTAAAGGAAGTTTATAAGGTTAATGGT
GTTATTAACAAATGTAAGGAAACTGGAGAGATTTATTTTATACCCAAAACTATTTGTTAA

Protein sequence : 
MIRGEKLSFNYKGEKNIINDLNIDIKEGEITTIIGPNGSGKSTLLSLLCALNKSKTGHVYLGDINMNNLKYKNIAKILAT
VHQQNSVPKDIKVEELVAYGRYPHKGYFKNNNKEDKNIIKWALECTGLDDLKHKGVMNLSGGERQRAFISMALAQKPKIL
FLDEPTTYLDIFHQIEILEIVKKLNKDNGLTVVMVLHDINQAIKYSHNIVVMKDGKIVKEGKSENVIDENLLKEVYKVNG
VINKCKETGEIYFIPKTIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-41 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-41 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-41 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-41 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-35 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-35 41
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_697549.1 ferrichrome ABC transporter VFG0925 Protein 3e-42 43