Gene Information

Name : CPR_2290 (CPR_2290)
Accession : YP_699565.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Resistance
Product : transcription repressor SmtB-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 2515773 - 2516132 bp
Length : 360 bp
Strand : -
Note : identified by match to protein family HMM PF01022

DNA sequence :

ATGGATAATAATAAAATAGAAAGTTGTAACTGTTCTTATATCCATGAAGATATATTAAGTAGGGTAAAAGAACATTTGCC
AAAGGAAGAAGTACTTTATGAATTAGCAGAAATATTTAAAGTTTTTGGAGATTCAACAAGAATAAAAATTTTATGTGCCC
TTTTTGAAGGTGAAATGTGTGTGTGTGATATGGCTGAATTATTAGGTGTAAGTCAATCAGCAGTATCTCATCAATTGAGA
GTTTTAAAACAAGCTAGATTAGTTAAGTTTAGAAGAGATGGCAAGATAGTTTATTACTCTTTAGCTGATGATCATGTTAA
ACACATATTCAATGAAGGTTTAAATCACGTTTTAGAGTAA

Protein sequence :

MDNNKIESCNCSYIHEDILSRVKEHLPKEEVLYELAEIFKVFGDSTRIKILCALFEGEMCVCDMAELLGVSQSAVSHQLR
VLKQARLVKFRRDGKIVYYSLADDHVKHIFNEGLNHVLE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	BAB47608.1	cadmium resistance protein C	Not tested	Type-III SCCmec	Protein	7e-23	44
cadC	BAC57488.1	Cadmium efflux system accessory protein homolog, cadmium resistance protein C	Not tested	Type-IIIinv SCCmec	Protein	7e-23	44

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CPR_2290	YP_699565.1	transcription repressor SmtB-like protein	BAC0366	Protein	5e-15	43