Gene Information

Name : rph (CPR_2240)
Accession : YP_699516.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2453553 - 2454299 bp
Length : 747 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGAAGTAGTGGAAGAAAAAAAGAACAGATAAGACCAGTTAAAATAACAAGAAACTTTACTAAATATGCAGAAGGTTC
TGTATTAATAGAAGTTGGGGATACTAAAGTATTATGTACTGCTTCAATAGAAGAAAAAGTTCCACCTTTTTTAAAGGGTT
CTGGAGAAGGGTGGATAACTGCTGAATATAACATGATTCCAAGAAGTACTCAAAGTAGAAAACAAAGAGATATAAATAAA
CTTAAAATAGATGGAAGAACAATGGAAATACAAAGACTTATAGGAAGAGCTCTTAGATCAGCTGTAGATATGAAAGCTTT
AGGAGAAAAAACTATTTGGATAGACTGTGATGTTCTTCAAGCTGATGGGGGAACTAGAACGACTTCTATTACAGGCTCAT
TTGTGGCGCTAGTTGATGCTGTAAATAAACTTCATCAAAAGAAACCTTTTAATGTTTATCCTATAAGACATTTTGTCAGC
GCAGTAAGTATTGGAATAGTAGGAGAAGAGAAAGTATTAGACTTATGCTATGAAGAAGACCATGTAGCTAAAGTAGATAT
GAATGTTGTAATGATAGAAGAGGGAGAATTTATAGAAATTCAAGGTACTGGAGAGATTGGACCTTTTTCAAGAAAAGAAT
TAGATGAATTATTAAATCTTGCTGAAAAAGGAGCGAAACAAATGATACAAGCACAAAAAAATGCTTTAAAGACAGATTCT
TTATGGATCGGAACAGGGAGAGAGTAA

Protein sequence :
MRSSGRKKEQIRPVKITRNFTKYAEGSVLIEVGDTKVLCTASIEEKVPPFLKGSGEGWITAEYNMIPRSTQSRKQRDINK
LKIDGRTMEIQRLIGRALRSAVDMKALGEKTIWIDCDVLQADGGTRTTSITGSFVALVDAVNKLHQKKPFNVYPIRHFVS
AVSIGIVGEEKVLDLCYEEDHVAKVDMNVVMIEEGEFIEIQGTGEIGPFSRKELDELLNLAEKGAKQMIQAQKNALKTDS
LWIGTGRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-61 56