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Name : CPR_2136 (CPR_2136) Accession : YP_699443.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2364922 - 2367084 bp Length : 2163 bp Strand : - Note : identified by match to protein family HMM PF00575 DNA sequence : ATGGACAATATAAATCATATTTTATCAAAGGAACTTGGTATTTCATTAAAACAGGTAATAAGTGTTATAGAAATGTTAGA TGAAGGAAATACAGTACCTTTCATAGCTAGATATAGAAAAGAAAGAACTGGTGGATTAACAGATGAGGTTCTAAGAAAAT TTAATGAGAGATTAACATATCTAAGAAATTTAGAAAGTAGAAAAGAAGATGTTTTAAGAATAATAGAGGAACAAGAAAAA TTAACTCCAGAATTAAAACTGAATATTGAGAAAGCTACTACTCTTACTGAGGTTGAAGATATATATAGACCTTTTAAAGC TAAAAAGAGAACAAGAGCTACTATGGCTATTGAAAAGGGATTAAAGCCACTAGCTGAGCTTATTCTATCAGGAGAATTTA ATGGTGATATAGTAGAAGAGGCTAATAAATATATTAATGAAGAAAAAGGTGTTAAAAATGAAGAGGAAGCTCTTCAAGGG GCTATGGATATTATAAGTGAAATAATATCTGATAATGCTGATTATAGAAAATGGATTAGAAATTTTGTTCAAAAGGATGG AATAATTCAGGTAAAAGGAAGCAGTGAAGAACAAACACCTTATGAAATGTATTATGATTATAAGGAACCTGTTAGAACAA TTCCATCTCATAGAATATTAGCTATAAATAGAGGAGAAAAGGAAAAAATTCTTTCTGTTAAAGTAACTTGTAATGATGAT AAAATTATAGATTATTTAAATAAAAAAGTTTTAAAGGGAAATAAAATTACTGATAAGTATTTAGAAGAAAGTATAAAGGA CTCCTTTAAAAGACTTATATATCCTTCAATAGAAAGGGAAATAAGAAGTGAGTTAACCTCTAAGGGAGAAGAGGGAGCCA TTGATATATTTAAGGCTAATTTAAAAGCTCTTTTAATGCAAGCGCCTATTAAGGGGAAAGTTGTAATGGGATTTGACCCT GGATTTAGAACTGGATGTAAGGTTGCAATCTTAGACGAAACAGGAAAATTTGTTGAGAATACAACAGTTTATCCAACAGC CCCTCAAAATAGAATTGATGAAACAATAAGTACACTTAAAAAACTTATTAAAAAACATGGAGTTCAAGTTATTTCTTTAG GAAATGGAACAGCTTCAAGAGAATCAGAAGAAGTAATTGCAAAAATGCTTAAGGAAATAAAAGATGAAACAGGAAAAGAG TTATTCTATGTTATAGTTTCTGAGGCAGGAGCTTCTGTTTATTCAGCATCAGAACTTGCAAATAAGGAATATCCAGACTT AGATGTAACTGTAAGAGGCGCAATTTCTATAGGAAGAAGACTTCAAGATCCATTAGCTGAGCTTGTTAAAATAGATCCTA AGGCTATAGGAGTAGGACAATATCAACATGATGTAACTCAGAAAAAACTTGATGAATCCTTAGCAGGGATAGTTGAGGAT TGTGTTAATAATGTAGGAGTAGATTTAAATATAGCAACTCCATCACTATTAAGTTATATTTCAGGTATAAATGCTTCAAT AGCTAAAAATATTGTTGATTATAGAGAAGAAAATGGTAAGTTTAAAAGTAGAAAAGAACTTTTAAAAGTTAAAAGATTAG GACAAAAAGCTTATGAACAATGTGCAGGATTCTTAAGAGTTATGGAAAGTAAAGAAGCTTTAGATAATACCTCAGTTCAT CCAGAGTCATATGGGGTAGCTAAGGAACTTATAAAAACTTTAGGATATACAGAAGAAGATTTAAAAAATGGCAAATTAGT AGATATAGATGAGAGAGTAAAAGCAAAAGGAATTTCTAACTTAGCAAAAGAATTAGAAGTTGGAGAACCAACACTTAATG ATATTATAAAGGAAATTAAAAAGCCTGGAAGAGATCCAAGAGAGGAATTACCTAAACCAATATTTAAGTCTGGCGTAATA GAAATGAAAGATTTAAAACCAGGTATGATTTTAATGGGGACAGTTAGAAATGTATCTGATTTTGGTGCTTTTGTAGATAT TGGAGTTCACCAAGATGGATTAGTTCATAAGAGCCAAATGGCAGATAGATTTGTTAAACATCCACTTGATATAGTTAAGG TTGGAGATATAGTAGAAGTTAGAATATTAGATGTTGATTTAAAAAGAAAGAGAATTTCATTATCAATGAAAAAAGAAGGT TAA Protein sequence : MDNINHILSKELGISLKQVISVIEMLDEGNTVPFIARYRKERTGGLTDEVLRKFNERLTYLRNLESRKEDVLRIIEEQEK LTPELKLNIEKATTLTEVEDIYRPFKAKKRTRATMAIEKGLKPLAELILSGEFNGDIVEEANKYINEEKGVKNEEEALQG AMDIISEIISDNADYRKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDYKEPVRTIPSHRILAINRGEKEKILSVKVTCNDD KIIDYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIEREIRSELTSKGEEGAIDIFKANLKALLMQAPIKGKVVMGFDP GFRTGCKVAILDETGKFVENTTVYPTAPQNRIDETISTLKKLIKKHGVQVISLGNGTASRESEEVIAKMLKEIKDETGKE LFYVIVSEAGASVYSASELANKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLAGIVED CVNNVGVDLNIATPSLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKAYEQCAGFLRVMESKEALDNTSVH PESYGVAKELIKTLGYTEEDLKNGKLVDIDERVKAKGISNLAKELEVGEPTLNDIIKEIKKPGRDPREELPKPIFKSGVI EMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQMADRFVKHPLDIVKVGDIVEVRILDVDLKRKRISLSMKKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 7e-161 | 47 |
