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Name : CPR_1936 (CPR_1936) Accession : YP_699246.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter permease (potB)-like protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 2141339 - 2142184 bp Length : 846 bp Strand : + Note : identified by match to protein family HMM PF00528 DNA sequence : ATGAAAAATAGAAATAAGAATTTATCATTTGCAGCTTATCCATACGTTTTATGGAGTGCTATATTCATAGTTATCCCTTT GCTTTTAATAGTTTTCTTTAGTTTTACAAGTAAAGTTGATGGAAGATTTGTTTTCTCTTTTGAAAACTTCCAAAGATTAT TTGAGCCCATATATTTTACTGTTTTTATACGTTCTATATGGCTTGCTGTTTTATCAACAGTTTTATGTTTAATTTTAGGT TATCCAATAGCTTATATGATTTCTAAATTGCCTATAAAAAGAAGAAATATGTTAATACTTTTATTTATATTACCAATGTG GATGAACTTCTTACTTAGAACATATGCGTGGATGGCTATACTTGGTAGAGATGGACTAATTAATACTCTTTTAGGTTATA TAGGAATAGGTCCAATTAAAATGCTATATACTGACGGAGCAATCTTACTTGGAATGGTATATAACTTCTTACCATTTATG GTTATACCAATATATACTGTACTTATAAAAATTGATAAAAACTTAGTTAATGCAGCTTATGACTTAGGTGCAAATAAAGC CCAAGCTTTTAGAAAAGTTATTTTACCACTTAGTATTCCTGGAATAATCTCTGGAATAACTATGGTATTTATGCCAGCTG TTTCAAACTTCGTAATTCCAAACCTTCTAGGTGGTGGAAAATATATGTTAGTTGGTAACCTTATAGAACAACAATTTACT ACTATCGGTAACTGGAACTTCGGTTCTGCTTTATCAATCTTTATGATGATATTAATACTAATTTCAATGGCATTTATGTC TAAATACGAAAAGAATGGAAAAGAAGGAGGTAAACAGCTATGGTAA Protein sequence : MKNRNKNLSFAAYPYVLWSAIFIVIPLLLIVFFSFTSKVDGRFVFSFENFQRLFEPIYFTVFIRSIWLAVLSTVLCLILG YPIAYMISKLPIKRRNMLILLFILPMWMNFLLRTYAWMAILGRDGLINTLLGYIGIGPIKMLYTDGAILLGMVYNFLPFM VIPIYTVLIKIDKNLVNAAYDLGANKAQAFRKVILPLSIPGIISGITMVFMPAVSNFVIPNLLGGGKYMLVGNLIEQQFT TIGNWNFGSALSIFMMILILISMAFMSKYEKNGKEGGKQLW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 5e-42 | 44 |
