Gene Information

Name : CPR_1891 (CPR_1891)
Accession : YP_699201.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2088309 - 2088980 bp
Length : 672 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAATAAAACGGTACTTATTGTAGAAGATGAAATACGTATAAGATTTCTTGTAAGAGATTACTTCAAAAAAGAGGGATT
TAATGTGTTAGAAGCTTCTGATGGTGAGGAAGCTCTTAGGATATTTTCTGAAAATATAGTTGATTTAGCAATATTAGATA
TAATGATGCCAAAATTAGATGGACTTGCTGTTTGTAGAAATATAAGGGAAGTTTCCAATACTCCTATAATATTATTAACA
GCTAAAAGCCAAGAAGAAGATAAACTTTTAGGTTATGAGCTTGGAGCTGATGACTATATGACTAAACCTTTTAGTCCTAA
GGTTTTATTAGCAAAGTCTAAAGCATTATTAAGAAGAACAGGTACATTAAATGATAAAAACATTTTAGATTTTAATGGAT
TAACAATAAATAAACTATCTCATGAAGTAAAACTAAATGGAGAAGAACTATTACTATCTCCTAAGGAATATGATTTACTT
ATTTATCTTTCTTCAAATGAAGGAATAGCTTTATCAAGGGATAGAATTCTAGATAATGTTTGGGGCTATGATTATTTTGG
AGATATAAGAACAGTTGATACGAACATAAAAAGACTTAGAGAGAAATTACTAGATAAAGCTAATTATATAGCTACTGTTA
GGGGAAGTGGCTATAAGTTTGAGGTGAAATAG

Protein sequence : 
MNKTVLIVEDEIRIRFLVRDYFKKEGFNVLEASDGEEALRIFSENIVDLAILDIMMPKLDGLAVCRNIREVSNTPIILLT
AKSQEEDKLLGYELGADDYMTKPFSPKVLLAKSKALLRRTGTLNDKNILDFNGLTINKLSHEVKLNGEELLLSPKEYDLL
IYLSSNEGIALSRDRILDNVWGYDYFGDIRTVDTNIKRLREKLLDKANYIATVRGSGYKFEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 5e-35 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 1e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 1e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 2e-40 45
CPR_1891 YP_699201.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-42 45
CPR_1891 YP_699201.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-30 44
CPR_1891 YP_699201.1 DNA-binding response regulator NC_012469.1.7686381. Protein 5e-40 44
CPR_1891 YP_699201.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 2e-38 44
CPR_1891 YP_699201.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 4e-37 43
CPR_1891 YP_699201.1 DNA-binding response regulator HE999704.1.gene2815. Protein 7e-38 43
CPR_1891 YP_699201.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 5e-37 42
CPR_1891 YP_699201.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 5e-37 42
CPR_1891 YP_699201.1 DNA-binding response regulator DQ212986.1.gene4.p01 Protein 3e-37 42
CPR_1891 YP_699201.1 DNA-binding response regulator AF310956.2.orf0.gene Protein 7e-35 41
CPR_1891 YP_699201.1 DNA-binding response regulator AM180355.1.gene1830. Protein 6e-38 41