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Name : pdp (CPR_1776) Accession : YP_699091.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1975353 - 1976654 bp Length : 1302 bp Strand : - Note : identified by similarity to SP:P39142; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGTATGATTTAATATTAAAAAAGAGAAATGGTGGGGAATTAAGCACTGAAGAAATAAACTTTTTTGTTGATAA ATATACAAATGGTGAAATACCTGATTATCAAGTAGCAGCCTTATTAATGGCTATATATTTCCAAAAAATGAATAAGAGAG AAACTTCGGATTTAACTATGGCTATGGTTAATTCAGGAGATATATTAGATTTAAGTGAAATACACGGTATAAAAGTAGAC AAGCATTCAACTGGTGGGGTTGGTGATACTACTACTTTAGTTTTGGGACCTATGGTTTCAGCTTTAGGAATTCCTGTAGC TAAAATGTCAGGAAGAGGTCTTGGACATACTGGTGGAACAATAGATAAATTAGAAAGTTTTGATGGATTCTCAGTAGAAA TGACTAAGGATCAATTTATAAATAATGTCAATAATATAAAATTAGCAGTTGGTGGACAAACAGGAGATTTAGCTCCAGCT GATAAAAAACTTTATGCTTTAAGAGATGTTACTGGAACTGTTGATAATGTATCATTAATAGCTTCAAGTATTATGAGTAA AAAAATTGCTGCAGGCGCTGACGCCATAGTATTAGACGTTAAGGTTGGAGATGGAGCATTTATGAAAACTCCAGAGGCAG CTAGAGAACTTGCAACTGAAATGGTTGGAATAGGTAAACATGTTGGAAGAAATACTGTTGCCATAATTTCAGATATGGAT CAACCTTTAGGATTTGCTATAGGTAATGCTTTAGAAGTTAAAGAAGCCATAGAAACTTTAAGAGGAAATGGTCCTAAGGA TCTTTTAGAGCTTTGTTTAACACTTGGAAGCAACATGGTTGTCTTAGCAGGTGCTGCTAAAGATACTGATGAAGCAAGAA AAATGTTAATGGAAACAATAACTTCAGGAAAAGCAATTGAAAAATTAAAAGAATTTGTAAAGGCTCAAGGTGGAGATGCA TCAGTTATTGATAATATATCAAATTTCCATAATGCTAAATATGTAATTCCAGTTAAAGCTAATAAATCAGGGGTTGTAAG TAAAATACATGCTGAAAACATAGGATTAGTTGCTATGGAACTTGGAGCAGGAAGAGCTACTAAAGAAAGTATTATAGATT TAGCTGTTGGTATTGTTCTTCAAAAGAAAAGAGGAGACAAAGTTAATGACGGAGATATAATAGCATATATTCATGCTAAT GATGAAGAAAAAGGTAATAAAGCAATAGATGGAATATTAGCTAATTACGAAATATCAGATTCAGTAAAAGATATTCCATT AATATATGATATAGTTAAATAG Protein sequence : MRMYDLILKKRNGGELSTEEINFFVDKYTNGEIPDYQVAALLMAIYFQKMNKRETSDLTMAMVNSGDILDLSEIHGIKVD KHSTGGVGDTTTLVLGPMVSALGIPVAKMSGRGLGHTGGTIDKLESFDGFSVEMTKDQFINNVNNIKLAVGGQTGDLAPA DKKLYALRDVTGTVDNVSLIASSIMSKKIAAGADAIVLDVKVGDGAFMKTPEAARELATEMVGIGKHVGRNTVAIISDMD QPLGFAIGNALEVKEAIETLRGNGPKDLLELCLTLGSNMVVLAGAAKDTDEARKMLMETITSGKAIEKLKEFVKAQGGDA SVIDNISNFHNAKYVIPVKANKSGVVSKIHAENIGLVAMELGAGRATKESIIDLAVGIVLQKKRGDKVNDGDIIAYIHAN DEEKGNKAIDGILANYEISDSVKDIPLIYDIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 9e-74 | 47 |
