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Name : serS (CPR_0014) Accession : YP_697363.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 21118 - 22395 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATTTAAAAAAGTTAAGAAGTAATACTGAAGAAGTGAAAAAAGCTTTATCTAATAGAGGAGAAGACTTTGATGT AAATGTTATAGACGAAGTTATAGCTTTAGATGAAGAAAGAAGAAAAATTTTAGTTGATGTTGAGGCTTTAAAGAAACAAA GAAATGAAGTATCAGCTGAAATTCCAAAGAGAAAAAAAGCTGGAGAAGACGTTACAGAAGTAATGGCTGAAATGAGAGAA ATAGGAGATAAAATAAAGGCTGATGATGCTAAAGTTGCTGAGTTAAACGATAAAATTAACTACATCATGCTAAGAATTCC TAATATACCAAACCCAGCTGTTCCAGAAGGGGAAACTGATGAGGACAATGTTGAAATAAAAAGATGGGGAGAGCCTACTA AATTCAACTTTGAACCAAAAGCACACTGGGATTTAGGAACAGATTTAGATCTTTTAGACTTCGAAAGAGGTGGAAAGATT GCTGGATCAAGATTTACAGTTTACAAAGGAATGGGTGCTAGATTAGAGAGATCTATAATAAACTACTTCTTAGATAAACA CACATTTGAAAATGGATACACTGAAGTATTACCACCATACATGGTAAATAGAGATAGTATGACAGGTACTGGTCAACTTC CAAAATTCGAAGAAGATGCTTTCAAAGTAGAAAACAATGGATATTTCTTAATACCAACAGCTGAGGTTCCTGTAACTAAT ATGTACAGAAATGAAACTTTAGAGGGAGATAAACTTCCAATAAAACATGCTGCATATAGTGCTTGTTTCAGAGCAGAAGC TGGTTCAGCAGGAAGAGATACAAGAGGGCTTATAAGACAACACCAATTTAATAAAGTTGAGTTAGTTAAGTTCTGTAAAC CAGAGCAAAGCTATGAAGAATTAGATAAATTAGTTCAAGATGCTGAATCTGTATTACAAGGTTTAGGATTACCATATAGA ATAGTTAGAATATGTAAAGGTGATTTAGGATTCACTGCTGCATTAAAATATGATATAGAAGTTTGGATGCCAAGCTACAA TAGATATGTTGAAATTTCAAGTTGTTCAAACTTTGAAGATTTCCAAGCTAGAAGAGCTAACATTAAATATAAAAATTCTC CAAAGGAAAAACCACAATTTGTTCATACATTAAATGGATCAGGGGTTGCTATTGGAAGAACTGTAGCTGCTATATTAGAA AACTATCAACAAGAAGATGGATCAGTAGTTATACCAGAAGCTTTAAAAGAATATATGAGATGTGATTTATTAAAGTAA Protein sequence : MLDLKKLRSNTEEVKKALSNRGEDFDVNVIDEVIALDEERRKILVDVEALKKQRNEVSAEIPKRKKAGEDVTEVMAEMRE IGDKIKADDAKVAELNDKINYIMLRIPNIPNPAVPEGETDEDNVEIKRWGEPTKFNFEPKAHWDLGTDLDLLDFERGGKI AGSRFTVYKGMGARLERSIINYFLDKHTFENGYTEVLPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPVTN MYRNETLEGDKLPIKHAAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPEQSYEELDKLVQDAESVLQGLGLPYR IVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIKYKNSPKEKPQFVHTLNGSGVAIGRTVAAILE NYQQEDGSVVIPEALKEYMRCDLLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-120 | 58 |
