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Name : CPR_0146 (CPR_0146) Accession : YP_697483.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : sortase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3764 EC number : - Position : 179660 - 180481 bp Length : 822 bp Strand : + Note : identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076 DNA sequence : TTGAAAAGGCTAAAAAGAATATATTTTTCTATTTTAATTTTGATTACACTTATTGCTCTAGGATTTTTGTTATATCCTAG TTTTTCTAATTACATAAATAATAAATTTGCAGTTTCTACAATTTCTGATTATACAGAGAAGATAAATAATGTTAAGGATG AAGAAGTTGATGATTTAATAAAAAATATTAATAAGTATAATTATGATTTATTTAATGGAACTGCTGAAAATCAATTGCCA GATTACTTAAATATTCATGAAGGGGATGTCTTAGGGTACATAGAAATTCCTAGTATAAATATTAAGTTACCTATATACTA TGGAACTTCAGTTGATATTTTGAAAAAAGGAGTTGGAGTTTTAGAGGGGACATCACTTCCTGTAGGAGGGGAAAATACTC ATTCAGTTTTATCAGCTCATACTGGATTAGCAAATCAAAAACTTTTTACTGATATAGACAAACTAAAAGATGGAGATGTT TTTTATTTGCATATTTTAAAAAAGGATCTTGCTTATAAAGTGAATCAAATAAAAGTTGTTCACCCAGATGAAATTGATGA ACTGAAAATATCAGATGACAAGGACTATGTAACTTTACTAACTTGTTATCCTTATGGGATTAATACTGAACGTTTATTAG TAAGGGGAGAGAGAACGGATTTAAGTCCAAGTAATGTAGAGCAGGTTCAAAAGGAAATAAGCACTTTTAATCATTCAAAT GAAAATTTAATACTAATAGTTATAATATTAAATTCAGTGCTAATAATTATTTTCTTATTGTTTTTAATTATGAAATTTAA AGGGAAAAATAAGAGTAGATAA Protein sequence : MKRLKRIYFSILILITLIALGFLLYPSFSNYINNKFAVSTISDYTEKINNVKDEEVDDLIKNINKYNYDLFNGTAENQLP DYLNIHEGDVLGYIEIPSINIKLPIYYGTSVDILKKGVGVLEGTSLPVGGENTHSVLSAHTGLANQKLFTDIDKLKDGDV FYLHILKKDLAYKVNQIKVVHPDEIDELKISDDKDYVTLLTCYPYGINTERLLVRGERTDLSPSNVEQVQKEISTFNHSN ENLILIVIILNSVLIIIFLLFLIMKFKGKNKSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| srtC | YP_005137206.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 2e-39 | 43 |
