Gene Information

Name : CPR_1583 (CPR_1583)
Accession : YP_698899.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Unknown
Product : ISCpe2, transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 1771917 - 1773071 bp
Length : 1155 bp
Strand : -
Note : identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766

DNA sequence :
GTGATAAGAAAGAAAGCATATAAATTTAGAATATATCCAACTAAGAAACAAGCGGAGCTAATTAACAAGACTATTGGATG
TTGTAGGTTTGTATTCAACTATTCTTTAGGTGTTCAAAAAACTAAAGATAATTATTGGAATATAGTTGAGGAGATGGTTC
AACAAGGCTACTTCCAAGAGAATAATTGGAAAGGCGAGTTCTTTAATAAAGCCAATTCAATTAAAGATATAGCTAAATTA
AAGAAAAGCTATGATTGGCTTAAAGAAGTAGATAGCATAGCACTACAGGCTTCTGTTGAAAATCTTGGTGCTGGATATGA
TAAGTATTACAAAAAAAAAGGTGGCAGACCTAAATTTAAGTCTAAGAAAAATGAAATACAATCTTATACTACTAAATTAG
TAAAAGCTAAGGGTAATGTAAATATTGAAATAGTAGGTAAAGGAATTAAACTACCTAAACTTGGATTAATTAAGATAGAA
AATTCAAGAAATATAGATGGAAATATTAAAAGAGTTACTGTGAACAGAACACAATCTGGTAAATATTTTGCATCCATTCT
TTGTGATGTAAATATTCAAGAATTACCTAAAATAGATAAAAAAGTTGGTGTAGATGTTGGACTTAAAACTTTTGCTGTTT
GTTCTGATGGATATGAAGAAGCTAATCCTAAACACTTTAGAAAGGCAGAAAAAAGACTTATTAAACTTCAAAGAGATTTA
GCTCGTAAAGAATATAATTCTAAAAACTATCACAAAAATAGAATTATGATTGCTAAATTACATGAAAGGATAGCAAATCA
AAGAATGGACTTCTTACAAAAATTTTCAACTAAGCTAATTAGAGAAAACCAATCAATAGCCATTGAAGATTTAAGAGTTT
CAAATATGCTTAAAAACCACAAACTTGCTAAAATAATTTCAGAAGCAAGTTGGTCAGAATTTAGAAGAATGCTAGAATAC
AAGGCTGAATGGTATGGTAGAAAAATAGTAATTGCTCCACCAGACTATGCAAGCTCTCAACTATGTTCCGAATGTGGTTA
TAAGAATACAGAAGTTAAAAACCTAGGTCTAAGAGAATGGGTATGTCCCGAATGTGGAACACACCATCAAAGAGACCTTA
ATGCTTCAATAAACTTGGAAAAGCTGATAGCTTAA

Protein sequence :
MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKL
KKSYDWLKEVDSIALQASVENLGAGYDKYYKKKGGRPKFKSKKNEIQSYTTKLVKAKGNVNIEIVGKGIKLPKLGLIKIE
NSRNIDGNIKRVTVNRTQSGKYFASILCDVNIQELPKIDKKVGVDVGLKTFAVCSDGYEEANPKHFRKAEKRLIKLQRDL
ARKEYNSKNYHKNRIMIAKLHERIANQRMDFLQKFSTKLIRENQSIAIEDLRVSNMLKNHKLAKIISEASWSEFRRMLEY
KAEWYGRKIVIAPPDYASSQLCSECGYKNTEVKNLGLREWVCPECGTHHQRDLNASINLEKLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 2e-155 99