Gene Information

Name : CPR_1566 (CPR_1566)
Accession : YP_698882.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Unknown
Product : ISCpe2, transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1759116 - 1759487 bp
Length : 372 bp
Strand : -
Note : identified by match to protein family HMM PF01797

DNA sequence :
GTGTATTGTATTCAATATCATATAGTATGGTGTGTTAAATACAGAAGAAAAGTATTGTTTGGTGATGTGGATAAATCTCT
TAAAGAAATAATATTAAAAATAGCAAATGATAATAATTTTGAAATTTCTGAAATGGAAACTGATAAAGATCATATACACC
TGTTAATAGAATGTTCTCCACAACATCAAATTCCAAATATAATTAAAGCGTTAAAGGGAGTATCTGCAAGGTTACTGTTC
TTGAAACATCCTGAAATTAAAAGATATCTATGGGAAGGAAACCTATGGAATCCAAGCTATTTTGTAGCTACTGTATCAGA
GAATACAGAAGAACAAATTAGAAACTATATTCAAAATCAACAAGTAAAGTGA

Protein sequence :
MYCIQYHIVWCVKYRRKVLFGDVDKSLKEIILKIANDNNFEISEMETDKDHIHLLIECSPQHQIPNIIKALKGVSARLLF
LKHPEIKRYLWEGNLWNPSYFVATVSENTEEQIRNYIQNQQVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0625 YP_697952.1 ISCpe2, transposase orfA Not tested Not named Protein 8e-42 96