Gene Information

Name : CPR_0119 (CPR_0119)
Accession : YP_697456.1
Strain : Clostridium perfringens SM101
Genome accession: NC_008262
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 149643 - 150413 bp
Length : 771 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGGTAAAGAGGTTTTAAAGGTAAGTAATATAGAAAAGTATTATGGTAAAAAAGGAAATGTTACAAAGGCCATTAATGA
TATTAGTTTTACTGTTTCAGAAGGGGAGTTTGTTGGAATAATGGGGGCTTCAGGAAGTGGTAAAACAACACTTTTAAATT
GTATATCAACCATAGATAAGGTAACTAGTGGTCATGTATATTTAGAGGGAGAGGATGTTACAAGCTTTAGTTCAAAAAAG
TTAGCTAAGTTTAGAAGAGAAAAAATAGGGTTTATATTTCAGGATTTTAATCTTTTAGATACCTTAACAGCTTACGAAAA
TATAGCCTTAGCTCTTACAATTCAAAGAGTGAATAATAAGGAAATAGATAAAAGAGTAAGACTCGTTGCAGAAGCATTAA
ATATAAGTAATGAGCTTAATAAATATCCTTATGAAATGTCAGGGGGACAAAAGCAAAGAGTGGCATCAGCAAGGGCAATA
GTTACTAATCCATCTTTAGTATTAGCTGATGAACCAACAGGAGCCTTAGATTCAAAGGCAGCTACCATGCTTCTTGAAAG
CTTAGAAGATTTAAATAAGAATTTAAATGCAACAATTATGATGGTAACTCATGATGCTTTTACAGCAAGTTATGCAAATA
GAATTTTATTTATTAAGGATGGAAAGATATTTAATGAACTTATAAAAGGAACTGATTCTAGAAAAGAATTTTTCAATAGA
ATAATTGAAGTCATAACTCTTCTTGGAGGTGACAGTAATAATGTATTTTAA

Protein sequence : 
MGKEVLKVSNIEKYYGKKGNVTKAINDISFTVSEGEFVGIMGASGSGKTTLLNCISTIDKVTSGHVYLEGEDVTSFSSKK
LAKFRREKIGFIFQDFNLLDTLTAYENIALALTIQRVNNKEIDKRVRLVAEALNISNELNKYPYEMSGGQKQRVASARAI
VTNPSLVLADEPTGALDSKAATMLLESLEDLNKNLNATIMMVTHDAFTASYANRILFIKDGKIFNELIKGTDSRKEFFNR
IIEVITLLGGDSNNVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPR_0119 YP_697456.1 ABC transporter NC_012469.1.7686878. Protein 3e-42 46
CPR_0119 YP_697456.1 ABC transporter CP001581.1.gene598.p Protein 9e-41 43
CPR_0119 YP_697456.1 ABC transporter CP001581.1.gene798.p Protein 6e-36 43
CPR_0119 YP_697456.1 ABC transporter NC_008702.1.4606598. Protein 6e-34 41