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Name : CPR_1082 (CPR_1082) Accession : YP_698404.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Virulence Product : bacteriocin ABC transporter ATP-binding/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1227583 - 1229799 bp Length : 2217 bp Strand : + Note : identified by similarity to GB:AAB81307.1; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193 DNA sequence : ATGTATATTAATAGGTATAAGTGTATAAAACAACATGACTATAAGGATTGTGGATGTGCATGTTTAGCTACTATATGTAA GCAATATGGATTAAAATTTCCAATATCTAAAATTAGAGAAGTAGCTGGAACAGATAAAGAGGGTACAAGTGCTTTAGGCG TTATACAGGCTGCTGAAAAACTTGGATTTTCATCTAAAGGAGTTAAAGCTAATAAACCCGAAGATATATTTGGAGAAATT CCACTTCCAGCTATAGCTCATGTTGTTATAGACAAGACAATGCTACATTATGTAGTTATACATAAAATTAGTAAAAAAGA AATTATAGTTGCTGATCCAGCTAAAGGAATAGTTAAATATAAACCTAGTGACTTCTTTAATATTTGGACAGGAATCCTTT TAATAATGACGCCGACCGCTGAATTTAAAAAAGGAAATGAAGTTAAAGGAGTATTCACTAGGTTTTTTGAACTATTAAAG CCACAAAAAGGATTACTTTTTAACATATTTCTAGCTTCACTTCTTATAACGGCATTTGGAATAATAGGGTCCTTTTATTT TAAATTTTTGTTGGATGACATAGTACCTAATAATTTAAGACAATCATTAACTATATTTTCTATAGGATTTATACTTTTAG CAATATTTAAGGTTATTACAGAAGCTTTTAGAACACAACTTCTTATTCATTTAGGACAACGTTTAGATATACCATTAATG TTAGGTTATTATGATCATGTAGTTAATCTTCCTATGAATTTCTTTGGTACAAGAGAAATTGGAGAGATTATATCAAGATT TAATGATGCATCAAAGATAAGACAGGCTATATCAGGGGTTGCTCTTACTATGATGATTGATGTGATTTTGGTTATAGTCG GAGGCGGAATTCTTTATTATCAAAGTTCATTACTATTTGGAATAACTATATTCCCTTTAATTTTATACGGAATAATTGTT TTTGTATTTAAGAGTAATATAGAAAAAGTTAATAGAGAAACTATGGAAGGTAATGCTAAGTTAACATCATATTTAGTAGA ATCTTTAAATGGAATAGAAACTATAAAAGCTTTTAATGCAGAAAGAGAAGTAAATTTAGAAACCGAAAAAAGATTTATAA AGTTTATAAAAGCTATATTTAAAAATGAGTACATAAATAATATTCAAGTATCTTTAAAAAGCTTGGTAAAAGGAGTTTTT GCTATAGTTATTCTATGGATTGGTACTGTTCAAGTTTTAAATGGAAAGATTTCCTTTGGTGAACTTTTAACTTTTAATGC TCTACTAGCATATTTCTTAAGTCCAGTAGAAAATATAATAAATCTACAACCAACACTTCAAACGGCAGTTGTAGCAGCGG AAAGATTAAGTGAAATATTAGATTTAGAACTTGAAAAGTCTGAGGAAGAATATAAAAAGATTATCCCTCAATCCTTAAAA GGAAAAATAGAGTTTAAAAATGTTGACTTTAGATATGGGACTAGACAACTTATTTTAAAAAATATAAATATGACTATTAA TAAAGGTGAAAGAATTGCACTAGTTGGAGAAAGTGGATCAGGTAAAACAACATTAGCTAAGTTATTACTTAATTTTTACC AATGTGAAAAGGGTGAAATTATAGTAAATGATTATAATTTATTAGATATTAATGTTGAAGCTCTTAGAGATAAGATAGCA TATATTTCTCAAGAAACATTTTTATTTAATGGAACTATAATAGAAAACTTAATGCTTGGAAATCCTTATTTAACGTATGA AGAGATTATTGAAGCTTGTAAAAAGGCTCAAATACATGATTTTATAAATTCATTACCATTAAGGTATAACACATTAGTTG AAGAAAATGGATCAAATTTCTCCGGAGGACAAAAGCAAAGATTATCTATTGCAAGAGCAATACTTAGAAAACCAGAGATT CTTATAATGGATGAAGCTACAAGTAATCTTGATTCTATAACTGAAAAAGCTATCGAAAAAACCATCCATGAATTTAGTGA AGGTATGACGACTATAATAATAGCTCATAGATTAAGCACTATTAAAAGGTGTGATAATATCTACATTTTAGAAAAGGGAG AAATAAAAGAACAAGGCAATCATAAAGAATTATTAAATAAAAAGGGTAGATATTATAAGCTATGGAAAGAACAACTTCCA GAAGTAGATAACATTGAAGAAGTTCAAGTTAAGGAGGTTGTTGAAGTTGAAATTTAA Protein sequence : MYINRYKCIKQHDYKDCGCACLATICKQYGLKFPISKIREVAGTDKEGTSALGVIQAAEKLGFSSKGVKANKPEDIFGEI PLPAIAHVVIDKTMLHYVVIHKISKKEIIVADPAKGIVKYKPSDFFNIWTGILLIMTPTAEFKKGNEVKGVFTRFFELLK PQKGLLFNIFLASLLITAFGIIGSFYFKFLLDDIVPNNLRQSLTIFSIGFILLAIFKVITEAFRTQLLIHLGQRLDIPLM LGYYDHVVNLPMNFFGTREIGEIISRFNDASKIRQAISGVALTMMIDVILVIVGGGILYYQSSLLFGITIFPLILYGIIV FVFKSNIEKVNRETMEGNAKLTSYLVESLNGIETIKAFNAEREVNLETEKRFIKFIKAIFKNEYINNIQVSLKSLVKGVF AIVILWIGTVQVLNGKISFGELLTFNALLAYFLSPVENIINLQPTLQTAVVAAERLSEILDLELEKSEEEYKKIIPQSLK GKIEFKNVDFRYGTRQLILKNINMTINKGERIALVGESGSGKTTLAKLLLNFYQCEKGEIIVNDYNLLDINVEALRDKIA YISQETFLFNGTIIENLMLGNPYLTYEEIIEACKKAQIHDFINSLPLRYNTLVEENGSNFSGGQKQRLSIARAILRKPEI LIMDEATSNLDSITEKAIEKTIHEFSEGMTTIIIAHRLSTIKRCDNIYILEKGEIKEQGNHKELLNKKGRYYKLWKEQLP EVDNIEEVQVKEVVEVEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 0.0 | 100 |
| CPR_0658 | YP_697985.1 | lactococcin g processing and transport ATP-binding protein | Virulence | Not named | Protein | 1e-134 | 43 |
