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Name : CPR_1054 (CPR_1054) Accession : YP_698376.1 Strain : Clostridium perfringens SM101 Genome accession: NC_008262 Putative virulence/resistance : Unknown Product : C4-dicarboxylate anaerobic carrier family protein Function : - COG functional category : S : Function unknown COG ID : COG1288 EC number : - Position : 1200884 - 1202392 bp Length : 1509 bp Strand : - Note : identified by match to protein family HMM PF03600; match to protein family HMM PF03606 DNA sequence : ATGAGTAAAAAGAAAAAAATTTCATTCCCTACAGCCTTTACTGTATTATTTATTGTTTTAATTTTATCAGCTATATTAAC TTATGTTATTCCAGCAGGATCATATTCAAAATTGTCTTATAATGAAGCTGAAAACACCTTTGTTGTTACAAATCCTCAAG GGGAAAGCACTAAGGAAAACGCAACTCAAAATACCTTAGATAAACTTGGTATAAAAATAAACTTAAGTAAATTTACTGAT GGAAGTATAAATAAACCAATAGCTATACCAAATACTTATGAAAAGGTTTCTCAAAATCCTCAAGGAATTTCTAAAATAAT AGAAGCTCCCATTCAAGGAACTTATGACACTATAGATATAATTATGTTCGTTCTAATAATAGGTGGAGTAATTGGAGTTT TAAATGCTACTGGAGCATTTAATGCCGGAATTGCTAGCCTTTCTAAAATAACTAAAGGAAAAGAATATATACTTATAATA TTATTATCAATACTTATTTCTCTTGGTGGTACTACTTTTGGATTGGCAGAAGAAACAATTGCTCTTTATCCTATTTTACT CCCAATATTCCTAGCTTCTGGCTATGATGCTATAGTATGTATTGCTACAATATATATGGGTTCATCTATAGGAACAATGT TCTCAACTGTAAACCCATTCTCTTCAGTAATAGCTTCAACAGCCGCTGGAATAAGCTTTAAAGAAGGCCTTGATTTTAGG ATGATAGGATTAGTTTTAGCTACACTTATAACAATAATTTATATACTTAGATATGCTAAAAAAGTTAAGAATGATCCTTC TAAATCCCTTGTATATGATCAAAAAGATGAAATAGATTCTAAATTTCTTCATGAATCTAATAATGATGTGCCAGTATTTA CTTGGAGACTTAAACTTATGCTTTTAATATTCGCTGGTTCATTTGTAATTTTAGTTTATGGAGTTTCAGCTAAAGGATGG GGATTTATACAAATGACTGCTCTATTCCTTGTAGTTGGAATAATTTTAGGTTTCCTTTCAGGACTTGGAGAAAAGAAATT TGTTAATACATTTATAGCTGGTGCTGCTGATTTGGTAGGAGTTGCCTTAGTTATAGGTGTTGCAAGATCTATAAACTTAA TACTTGAAAATGGTAAAATATCAGATACTTTACTTTATGTATCCTCAAATGGAATTCAAGGTATGGATAAAAATATATTT ATAATATTAATGCTTGTTATATTCATAATCTTAGGATTCTTTATTCCATCTTCATCTGGTCTTGCTGTTTTATCAATTCC AATAATGGCACCACTTGCAGATACAGTTGGTTTACCAAGGGATGTTATAGTTAGTGCTTACCAATTTGGTCAAGGATTAA TCTCCTTTATAACTCCAACAGGATTAATTTTAGCTACCCTTGCTATGGTTGATGTAACCTATAATAAATGGCTGAAATTT ATTATGCCTTTAATGGGAATTATAGCAGCCTTTGCAGCCTTACTATTATTAGTACAAGTACACTTTTAA Protein sequence : MSKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFVVTNPQGESTKENATQNTLDKLGIKINLSKFTD GSINKPIAIPNTYEKVSQNPQGISKIIEAPIQGTYDTIDIIMFVLIIGGVIGVLNATGAFNAGIASLSKITKGKEYILII LLSILISLGGTTFGLAEETIALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESNNDVPVFTWRLKLMLLIFAGSFVILVYGVSAKGW GFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVGVALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIF IILMLVIFIILGFFIPSSSGLAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF IMPLMGIIAAFAALLLLVQVHF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAV1171 | NP_371695.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-96 | 48 |
| SA1014 | NP_374287.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-96 | 48 |
| SAKOR_01092 | YP_008491280.1 | Arginine/ornithine antiporter | Not tested | vSa¥ã | Protein | 5e-97 | 48 |
| SACOL1183 | YP_186046.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 3e-97 | 48 |
| SAUSA300_1064 | YP_493762.1 | TRAP family protein | Not tested | vSa¥ã | Protein | 3e-97 | 48 |
| MW1052 | NP_645869.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 3e-97 | 48 |
