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Name : CPF_0910 (CPF_0910) Accession : YP_695359.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1073139 - 1074983 bp Length : 1845 bp Strand : + Note : identified by similarity to SP:P39853; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF0 DNA sequence : ATGAATAGTGTACGTAAAATAAAGTGTTTATTTCTAATATTCTTAGATATTTTATTTATAAATTTAGGGTATTTCATAAG TTTATGTTTTGAATATGGAAAAGAAATGAAAATAGAGTATTTTTTTAATATTAGAAATTTAATTATATTAGCAATTTTTA CGAATATATTGATATTTTGCTTTTTTAATCTTTATAAAAATATTTGGCACATGGCAGGGATTAGCGAGTGTATAAGGTGT TTAATAGCGTCTTCAATAAGTTCTATATTATTAATATTATATAAATTTATTTTTAATATGGATGTAACAATAGTATTTTT AATTAATAGTAGCATTTTAATTTGTATGTTTTCATTACTTACACGTATGTCTATAAGAATTTTTAGGAAAATATATTTTC CTTATAAACTTGAATCCAACTTAAGAAAAAATGTTCTTATAGTTGGAGCTGGTCACTGTGGACGTATTGTTATAGATGAG ATGAATAAAAATAATAAATTTAATCCTATTGGTATAGTTGATGATGATTTAAATAAAAAAGGAACTTTTTTAAATGGTGT GAAGGTACTTGGAAATAGAGATGATATAGAAAAAATATGTAAAAGAATAAAAGTAGATATTATTTTAATTGCGATTTCAA ATTTATCATCAAATGACAAGGATGAAATTATAAAAAGATGTGAAAATACAAAGATAAAAGTAAAAATAATTCCAAGTATA TATGATTTAATTGATGGAAATGTTAAATTAACTAATATTAGAGACATTGATTTAAGAGATTTATTAGGAAGAGATGAAAC TAGATTAGACAAAGAGGAGGTAAATAATTATATAAAAGAAAAAATTGTTATTGTAACTGGAGGAGGAGGTTCTATTGGTT CAGAACTTTGTAGGCAGATAGCAGTGTTTAATCCTAAAAAGCTTATTATATTAGATATTTATGAAAATTATGCTTATGAA TTAGAAAATGAATTAAAAAGAAATTTTAAAAATTTAGATTTAGAAGTTATTATAGCTTCTATAAGAGACAAATCTAGATT AAAGAAAATATTTGATAAGTATAAACCAGATTTAATATTTCATGCGGCAGCCCATAAGCATGTACCTTTGATGGAAAATA ATCCAGAAGAAGCTATAAAAAATAATGTTTTAGGAACTTTAAATGTAGCAGAATGTGCTGATGAATTTAATTTAGAGAAG TTTGTATTTATATCTACTGATAAGGCAGTTAATCCAACTAATATAATGGGGGCAACTAAAAGAATTGGTGAGATGATAAT ACAAGCTATGAATGAAGTTAGTAAAACAGATTTTGTTGCAGTAAGATTTGGAAATGTATTAGGAAGTAATGGTTCAGTTA TTCCACTATTTATAGAACAAATAAAAAATGGAGGACCTGTTACTTTAACTCATAAGGATATAACAAGATATTTTATGTTA ATTCCAGAAGCAGCACAACTTGTACTTCAGGCAGGAGCTTATGCAAAAGGTGGAGAAATTTTTGTTCTTGATATGGGAAA ACCAGTAAAAATTTATGATTTAACAGAAAAATTAATAAGATTATCAGGGTTTGAACCGAATAAAGATATACAAATAAAGA TTGTGGGACTTAGACCAGGAGAAAAGCTTTATGAGGAACTTATTTTAAGTGAAGAAGAGCTTAAAAAGACTAAGAATGAA AAAATATTTATATTAAGTCCATTTAAGTTTGATATTAAAGAGATTAAAAAGAAAATAGTAGAACTTTTAAATGTAGCTTT AAATGAAGATAAAAAAGCCATTAAAGAGAAGCTTAAAGAAATTGTGAAAAATTATAGAGATTTAGAGCAAATAGATTTTA TATAA Protein sequence : MNSVRKIKCLFLIFLDILFINLGYFISLCFEYGKEMKIEYFFNIRNLIILAIFTNILIFCFFNLYKNIWHMAGISECIRC LIASSISSILLILYKFIFNMDVTIVFLINSSILICMFSLLTRMSIRIFRKIYFPYKLESNLRKNVLIVGAGHCGRIVIDE MNKNNKFNPIGIVDDDLNKKGTFLNGVKVLGNRDDIEKICKRIKVDIILIAISNLSSNDKDEIIKRCENTKIKVKIIPSI YDLIDGNVKLTNIRDIDLRDLLGRDETRLDKEEVNNYIKEKIVIVTGGGGSIGSELCRQIAVFNPKKLIILDIYENYAYE LENELKRNFKNLDLEVIIASIRDKSRLKKIFDKYKPDLIFHAAAHKHVPLMENNPEEAIKNNVLGTLNVAECADEFNLEK FVFISTDKAVNPTNIMGATKRIGEMIIQAMNEVSKTDFVAVRFGNVLGSNGSVIPLFIEQIKNGGPVTLTHKDITRYFML IPEAAQLVLQAGAYAKGGEIFVLDMGKPVKIYDLTEKLIRLSGFEPNKDIQIKIVGLRPGEKLYEELILSEEELKKTKNE KIFILSPFKFDIKEIKKKIVELLNVALNEDKKAIKEKLKEIVKNYRDLEQIDFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-72 | 48 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-72 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPF_0910 | YP_695359.1 | capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 1e-72 | 46 |
| CPF_0910 | YP_695359.1 | capsular polysaccharide biosynthesis protein | VFG0029 | Protein | 2e-61 | 41 |
