Gene Information

Name : CPF_0810 (CPF_0810)
Accession : YP_695261.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 960211 - 960993 bp
Length : 783 bp
Strand : +
Note : identified by similarity to SP:P49938; match to protein family HMM PF00005

DNA sequence : 
ATGAATTGTATAACTACTGATAATTTAAATATTTCATATGGAAGTTTAGATATAGTTAAAAATTTAAACTTAAATATACC
AAAGGGGAAAATAACTACAATAATAGGTGCAAATGGATGTGGAAAATCTACAGTGCTAAAAACAATAGCTAGAATTTTAA
CTCCTAAAAGTGGGGAAATATATATAAATGAAAAAAACATAAAAGAGCAGGGAGCTAAGGAGTTAGCAAAGGTTATGGCA
GTTTTACCTCAAAGTCCTCAAGCACCTAATGGGCTTACTGTTGAAGAGTTAATAGCCTATGGAAGATTCCCTCATCAAAA
AGGATTCGGTAAATTAAAAAAAGAGGACAAAAATATAATTCAATGGGCTTTAGAGGTTACAGGATTAATTGAATTTAGGG
AAAGAGACATAGAAGATTTATCTGGAGGGCAAAGACAAAGAGCTTGGATTGCTATGGCCTTAGCACAGCAAACAGATATA
TTAATACTTGATGAGCCAACAACTTATTTAGATTTAGCCCATCAATTAGAGATTTTAAATTTACTTAAGGAATTGAATGA
GAAGCATGGGACAACTATAGTTATGGTTATTCATGAACTTAATAATGCTGCTAGATTTGCCGATTATATGATAGGTATGA
AAGCAGGAAAAATAGCTTGTGAAGGTACAGCATATGAAGTTATGACAAAAGAAAATCTTAAAGAGTTGTTTAATATAGAT
GCAGAAATTATAGAGGATCCAATAAATAAAAGACCAGTCTGTGTGACTTATGATATGTTATAA

Protein sequence : 
MNCITTDNLNISYGSLDIVKNLNLNIPKGKITTIIGANGCGKSTVLKTIARILTPKSGEIYINEKNIKEQGAKELAKVMA
VLPQSPQAPNGLTVEELIAYGRFPHQKGFGKLKKEDKNIIQWALEVTGLIEFRERDIEDLSGGQRQRAWIAMALAQQTDI
LILDEPTTYLDLAHQLEILNLLKELNEKHGTTIVMVIHELNNAARFADYMIGMKAGKIACEGTAYEVMTKENLKELFNID
AEIIEDPINKRPVCVTYDML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-51 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-51 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-46 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-46 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-46 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-46 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPF_0810 YP_695261.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 6e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPF_0810 YP_695261.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 5e-50 42
CPF_0810 YP_695261.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 4e-50 42