Gene Information

Name : CPF_0772 (CPF_0772)
Accession : YP_695223.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : sortase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3764
EC number : -
Position : 920024 - 920863 bp
Length : 840 bp
Strand : +
Note : identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076

DNA sequence :
TTGAAAGGCGTTAAGAAGATTTATATTGTTTTAATATTTATACTTGGATTAAGCATAGCTTTTTATCCATTGATAAGTGA
TCAATGGAATAAATATAGGGCTAATAAATTAATTGCTAATTATGATAATGTTGTTAAAGAAATAAAACCTGATGAAATTA
AAAAGAAAATAGATGATGCTAGAAAGTACAATGAAACATTAATTGGTGGGGTTGTACCAGATGCTTTTTCCGTTAGAAAT
GGTGTTAAAGATAAGGAGTATGAATCATTACTAAATATAAATAATGATGGAATAATTGGAAGTGTTGAAATCCCATCAAT
TGATGTTAACATACCAATTTATCATTATACTACAGATGAAGTATTGGCTAAGGGGGCTGGTCATCTTTTTGGTAGTTCGT
TACCTGTAGGTGGAGAGAGCTCACATACTGTTATTTCAGCTCATAGGGGATTGCCAAGTGCTAAGTTATTTACTGATTTA
GATCAACTTAAAGAAGGAGATTTATTCTATTTTCATGTATGTGGTGAAATTTTTGCATATAAAGTAGATCAAATATTAGT
TGTTGAACCAGAGCAAACTTCTGAATTAGCAATTAAGGAAGGTGAAGATTTGGCTACTTTATTTACATGTACACCGTACT
CAATTAACTCACATAGATTATTAGTTCGTGGTCATAGAGTTCCATACGATAAAAAAGAAGAAATTCAAGAGAAAGAAAAA
GTAAAAAATGTACAACCGTATTTCTTAATAGTAGAAATTGCATGTATTATTGGAGGAATATTATTAGCTTTAATTTTAGT
TAAATTACTTGACTTTATTAAAAAAAGACGAAAAGAGTGA

Protein sequence :
MKGVKKIYIVLIFILGLSIAFYPLISDQWNKYRANKLIANYDNVVKEIKPDEIKKKIDDARKYNETLIGGVVPDAFSVRN
GVKDKEYESLLNINNDGIIGSVEIPSIDVNIPIYHYTTDEVLAKGAGHLFGSSLPVGGESSHTVISAHRGLPSAKLFTDL
DQLKEGDLFYFHVCGEIFAYKVDQILVVEPEQTSELAIKEGEDLATLFTCTPYSINSHRLLVRGHRVPYDKKEEIQEKEK
VKNVQPYFLIVEIACIIGGILLALILVKLLDFIKKRRKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-44 44
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-40 43
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-43 41