|
Name : CPF_0705 (CPF_0705) Accession : YP_695157.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : choloylglycine hydrolase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3049 EC number : 3.5.1.24 Position : 838665 - 839654 bp Length : 990 bp Strand : + Note : identified by similarity to SP:P54965; match to protein family HMM PF02275 DNA sequence : ATGTGTACAGGATTAGCCTTAGAAACAAAAGATGGATTGCATTTATTTGGAAGAAATATGGATATTGAATATTCATTTAA TCAATCTATTATATTTATTCCTAGAAACTTTAAATGTGTAAACAAATCAAACAAAAAAGAATTAACAACAAAATATGCTG TTCTTGGAATGGGAACTATTTTTGATGATTATCCTACCTTTGCAGATGGTATGAATGAAAAGGGATTAGGATGTGCTGGC TTAAATTTCCCTGTTTATGTTAGCTATTCTAAAGAAGATATAGAAGGTAAAACTAATATTCCAGTATATAATTTCTTATT ATGGGTTTTAGCTAATTTTAGCTCGGTAGAAGAGGTAAAGGAAGCATTAAAAAATGCTAATATAGTGGATATACCTATTA GCGAAAATATTCCTAATACAACTCTTCATTGGATGATAAGCGATATAACAGGAAAGTCTATTGTAGTTGAACAAACAAAG GAAAAATTAAATGTCTTTGATAATAATATTGGAGTATTAACTAATTCACCTACTTTTGATTGGCATGTAGCAAATTTAAA TCAATATGTAGGTTTGAGATATAATCAAGTTCCAGAATTTAAGTTAGGAGATCAATCTTTAACTGCTCTAGGTCAAGGAA CTGGTTTAGTAGGATTACCAGGGGACTTTACACCTGCATCTAGATTTATAAGAGTAGCATTTTTAAGAGATGCAATGATA AAAAATGATAAAGATTCAATAGACTTAATTGAATTTTTCCATATATTAAATAATGTTGCTATGGTAAGAGGATCAACTAG AACTGTAGAAGAAAAAAGTGATCTTACTCAATATACAAGTTGCATGTGCTTAGAAAAAGGAATTTATTATTATAATACCT ATGAAAATAATCAAATTAATGCAATAGACATGAATAAAGAAAACTTAGATGGAAATGAAATTAAAACATATAAATACAAC AAAACTTTAAGTATTAATCATGTAAATTAG Protein sequence : MCTGLALETKDGLHLFGRNMDIEYSFNQSIIFIPRNFKCVNKSNKKELTTKYAVLGMGTIFDDYPTFADGMNEKGLGCAG LNFPVYVSYSKEDIEGKTNIPVYNFLLWVLANFSSVEEVKEALKNANIVDIPISENIPNTTLHWMISDITGKSIVVEQTK EKLNVFDNNIGVLTNSPTFDWHVANLNQYVGLRYNQVPEFKLGDQSLTALGQGTGLVGLPGDFTPASRFIRVAFLRDAMI KNDKDSIDLIEFFHILNNVAMVRGSTRTVEEKSDLTQYTSCMCLEKGIYYYNTYENNQINAIDMNKENLDGNEIKTYKYN KTLSINHVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0521 | NP_814299.1 | choloylglycine hydrolase | Not tested | Not named | Protein | 5e-57 | 45 |
| ef0040 | AAM75246.1 | EF0040 | Not tested | Not named | Protein | 4e-57 | 45 |
