|
Name : leuS (CPF_0657) Accession : YP_695110.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : 6.1.1.4 Position : 786159 - 788609 bp Length : 2451 bp Strand : - Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGGGTAACTATAGTACTGCCATAGATAAGAAATGGCAAGAAAAATGGGCTGAATCAGGCCTTTATAAATTTGATCCAAA TAAAGAAGGAGAGAAACTTTACGTTTTAGAAATGTTTTCATACCCTTCAGGTAGCCAATTACATGCAGGTCACTGGTTTA ACTATGGACCAGTTGATTCATGGGCTAGATTTAAAAGAATGCAAGGATATAATGTATTCCAACCAATGGGATTTGATGCT TTCGGTTTACCTGCTGAAAACTTTGCTATAAAAACAGGAATACATCCTCAAGATTCTACAATAAAAAATATAGCTAAAAT GGAAGAACAATTAAAAGCTATGGGAGCTATGTTTAACTGGGAAAACGAAGTTGTAACTTGCTCACCTGAATATTATAAAT GGACTCAATGGCTATTCCTAAAATTATACGAAAAAGGATTAGCTTATAGAAAAAAAGCTCCTGTAAACTGGTGTCCATCA TGTCAAACAGTTCTTGCTAATGAGCAAGTAGTTGATGGAGCTTGTGAAAGATGTTCAACAGAAGTTACTAAAAAAGATCT TACTCAATGGTTCTTTAAAATAACTGATTATGCTGATGAATTATTAGATAAATTAGATGATTTAGATTGGCCAGAAAAAA CAGTTTCTATGCAAAAACACTGGATAGGAAGATCAACTGGTTCTCAAGTTAACTTTAAAGTTAAAGATAGCGATTTAAAC TTTGATGTATTCACAACAAGAGTTGATACTTTATGCGGAGTTAGCTATGTTGTTTTAGCTCCTGAAAATCCATTAGTAGA CGAAATAGTTTCAGCTGAACAAAAAGAAGCTGTTGAAAATTATAAAGAAGAAGCTAAAAAACAATCTGATATAGAAAGAC AATCTATTTCAAGAGAAAAAACGGGTGTATTCACTGGTGCATATGCTATTCATCCATTAACAGGTAAAGAAGTTCCTATA TGGGTTGGAGACTACGTTCTAGCAACTTACGGAACTGGAGCTGTTATGGCTGTTCCTGCTCATGATGAAAGAGATTTTGC TTTTGCTGAAAAATTCAACCTTCCAATAAATAGAGTTATAGAAGCTAAAGATGGTAGTGAAACTAACCTTCCATTCTGCG AGCACGGTATATTAGTTAACTCAGGTGAATTTGATGGATTAACTACAGATGAAGCTAAAGAAAAAATAGTTGAAAAACTA GCTTCAATGGGTCTTGGAGAAAAGAAAGTTAACTTTAGATTAAGAGACTGGTTAGTTTCAAGACAAAGATACTGGGGAGC TCCAATTCCTGTAGTTTACTGTGAAGAATGTGGTATAGTTCCTGTACCTGAAAGTCAATTACCAGTTGAATTACCATATG ATGTTGAATTTGCTCCAGATGGAAAATCTCCACTAGCTAAGAGCGAAGCATTTGTTAATACAACTTGCCCTCACTGTGGA AAACCAGCTAAGAGAGAAACTGATACTTTAGATACTTTCGTATGTTCATCATGGTATTACTTAAGATATCCTGATAATAA AAATACTGAGGCTCCATTTAATCCTGAATTAATCAACAAAATGTTACCAGTTGATAAATACGTTGGTGGACCTGAACATG CTTGTATGCATCTTCTTTACGCAAGATTCATAACTAAAGCCCTAAGAGATATGGGATACCTAAACTTTGATGAACCATTT ACTTCATTAACTCACCAAGGATTAATCTTAGGACCAGACGGATTAAAAATGAGTAAATCAAAAGGAAATACAATATCTCC TGATGATTATATAAAAGAATATGGTGCAGATGTATTTAGAATGTACCTAATGTTTGGTTTTGCTTACACTGAAGGTGGAG CTTGGAGTGATGATGGAATCAAATCTGTAAATAGATTCGTTGAAAGAATTGAAAGAATTATAGATACTGCTAGAGAAGCA ATCTCAAAAGGTGAAAATAATAAAACTACAATGGATAAGGCTGAAAAAGAGCTTAACTATTGGAGACACAATACTATAAA ATCTGTTACAGATGATACAGATAAACTTCAATTTAATACAGCAATAGCTAGAATGATGGAATTCATAAATGCTTTATCTA AATATACTCAAGAGAAAGAAATGAATCTTGATTTCTTAAAAGATGTAGTTTCTGATTATTTAAGATTATTAGCACCATTT GCACCTCACTTCAGTGAAGAACAATGGAGCTTACTTGGAAATTCATACTCAATCTTCAATGAAGCATGGCCAAAATTTGA CCCTAAAGCTTTAGTTAAAGACGAAGTTGAAATAGCTATACAAGTTAACGGAAAAATCAAAAACAAAATAATGGTTTCTT CTGATTTAGATGAAGAAGGAATAAAAGCCGCTGCTTTAGCTGATGAGAAAATCATAGCTTCAACAGAAGGAAAAACAGTT GTAAAAGTAATAGTTATAAAAGGTAGACTTGTAAATATAGTTGTTAAGTAA Protein sequence : MGNYSTAIDKKWQEKWAESGLYKFDPNKEGEKLYVLEMFSYPSGSQLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDA FGLPAENFAIKTGIHPQDSTIKNIAKMEEQLKAMGAMFNWENEVVTCSPEYYKWTQWLFLKLYEKGLAYRKKAPVNWCPS CQTVLANEQVVDGACERCSTEVTKKDLTQWFFKITDYADELLDKLDDLDWPEKTVSMQKHWIGRSTGSQVNFKVKDSDLN FDVFTTRVDTLCGVSYVVLAPENPLVDEIVSAEQKEAVENYKEEAKKQSDIERQSISREKTGVFTGAYAIHPLTGKEVPI WVGDYVLATYGTGAVMAVPAHDERDFAFAEKFNLPINRVIEAKDGSETNLPFCEHGILVNSGEFDGLTTDEAKEKIVEKL ASMGLGEKKVNFRLRDWLVSRQRYWGAPIPVVYCEECGIVPVPESQLPVELPYDVEFAPDGKSPLAKSEAFVNTTCPHCG KPAKRETDTLDTFVCSSWYYLRYPDNKNTEAPFNPELINKMLPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPF TSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEYGADVFRMYLMFGFAYTEGGAWSDDGIKSVNRFVERIERIIDTAREA ISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQFNTAIARMMEFINALSKYTQEKEMNLDFLKDVVSDYLRLLAPF APHFSEEQWSLLGNSYSIFNEAWPKFDPKALVKDEVEIAIQVNGKIKNKIMVSSDLDEEGIKAAALADEKIIASTEGKTV VKVIVIKGRLVNIVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 4e-170 | 47 |
