Gene Information

Name : CPF_0649 (CPF_0649)
Accession : YP_695102.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : -
Position : 778934 - 779782 bp
Length : 849 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
ATGAAGGAATATTTTATTGGATTATATGAGAAAGCTATGCCTAATACACTTACTTGGAGAGAAAAGCTTCAATGTGCAAA
AGAGAATAATTTTGATTTTTTAGAGGTTAGCATAGATGAAACTGATGAAAAATTAAAAAGACTTGATATGACAAAAGAAG
AAAGACAGGTTTTAGTAGACCTTATGTATGAAGTTGGTCTTCCAATAAGAACCATGTGTCTTAGTGGACATAGAAAATAT
CCTATAGGAAGTGCAGATGAAACAACTAGAAATCGTGGTATGAGAATAATGGAGAAGGCCATAGAGCTAGCTGATGATTT
AGGAATTAGGATAATTCAATTAGCAGGGTATGATGTTTACTATGAAGAGGGTAGTGAAGAAACAAGAAAATTATTTTATG
AAAATCTAAAAAAATCTGTTGAAATGGCTGCTAGATCAGGAATAATTTTAGCTTTTGAAACTATGGAGACTGAGTTTATG
AACACAGTTGAAAAAGCCATGAATTATGTTAAAAAGATTGATTCACCATATTTAGGGGTTTATCCTGACTGTGGAAATAT
AACTAATGCCGCTACTAAATATAATAAAAATGTTATTGAAGATTTAAGAAGTGGTAAAGGTCATATAATGGCTGTTCATC
TTAAGGAAACAAAACCAGGTAAGTTTAGAGAAATTCCATTTGGAACTGGACATGTTGATTTTGAAAGTATAATAAAAGAA
TCATATAATATGGGAGTAAGAAGATTTGTTACTGAGTTCTGGTACACAGGTACTGGTGACTACAGAGTTGAGATAAAGAA
TTCAAGAAAATTTATAGAGGAAAAATTTAATAAAGCCTTAGAAAAGTAA

Protein sequence :
MKEYFIGLYEKAMPNTLTWREKLQCAKENNFDFLEVSIDETDEKLKRLDMTKEERQVLVDLMYEVGLPIRTMCLSGHRKY
PIGSADETTRNRGMRIMEKAIELADDLGIRIIQLAGYDVYYEEGSEETRKLFYENLKKSVEMAARSGIILAFETMETEFM
NTVEKAMNYVKKIDSPYLGVYPDCGNITNAATKYNKNVIEDLRSGKGHIMAVHLKETKPGKFREIPFGTGHVDFESIIKE
SYNMGVRRFVTEFWYTGTGDYRVEIKNSRKFIEEKFNKALEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 2e-52 45