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Name : CPF_0645 (CPF_0645) Accession : YP_695098.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 775083 - 776549 bp Length : 1467 bp Strand : + Note : membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr DNA sequence : ATGGATTTTATAATCTACATTTGGGAGTTTTTCCAAAATAACATTCTGACAAAACCTGCATTTTTCATTGGATTTATAGT TCTTATTGGTTACTTGTTACTTAAGAGACCTTTTTATGATGCTTTGGCAGGATTTATAAAGGCAACAGTCGGTTATTTAA TTTTAAATGTTGCAGCAGGTGGACTTGTTAGTAACTTCCGTCCAATTCTTGCAGGCCTTAAAGATAGATTTAATTTACAG GCGGCAGTTATAGATCCTTATTTTGGACAAACGGCGGCTCAAGAGGCTATAGGGAATATAGGAAAATCTTTTTCTATGAT GATGGTAGTTTTACTTATAGCATTCTTATTTAACTTAGTGCTTGTATTACTTAGAAAATTTACAAAGGTTCGTACAGTAT TTATTACAGGACATGTAATGGTACAACAATCAGCTACAGCTTTATGGTTAGTATTTTTCTGTTTCCCAAACTTAAGTAAT ATGGGAGTAGTAGTAATGTTAGGATTACTTCTTGGAACATACTGGGCAGTATTTTCTAATCTTACAGTTGAACCATGCCA AGACCTTACTGAAGGTGGTGGATTTGCAATAGGTCACCAACAAATGTTAGGAGTTTGGATAACTGATAAAATAGCTGGAA AAATAGGAAATAGTAAAAAGAGTATTGAGGATTTAGAACTTCCAGGATTCTTATCTATATTTAGTGATAACGTTGTAGCA ACTGGTATATTAATGACTGTTTTCTTCGGAATAATTATGGGAATACTAGGACCAGATTTAATGCATACAATCGATAAGGG ATTTGATCAAAATACAAATTTCTTATTTTACATACTAGAAAAATCACTTAACTTTGCAGTTTATTTAAGTATATTACAAA TGGGTGTTAGAATGTTCGTTTCAGAACTTACTGAATCATTCCAAGGTATTTCAAATAAAATACTTCCAGGATCAGTACCA GCTGTAGACTGTGCAGCAACTTATGGATTTGGACATCCAAATGCAGTTACTATTGGATTCTTATTTGGAGCAGTAGGTCA ATTTATAGCAATAATAGGACTTGTAGTTTTCCAAAGTCCAGTACTTATAATAAGTGGATTCGTACCATTATTCTTTGATA ATGCTACATTTGCAGTGTTCGCTAACAGAAAAGGTGGATTGAAGGCTGCCATGATAATTCCATTCGTTTCAGGAGTTATA CAAGTTTTAGGTGGAGCATTTGCCGCTTACTATTTTGGATTAGCTCAATTTGGAGGATGGCATGGAAACTTTGACTGGGA TACATTATGGCCAGTAGTTGGAGTTCTTATGGACAAGTTTGCTTATGTAGGGGTTGGAATAGCAGTAGTAGGAATGCTTT TAATACCACAAATTCAATATTTTAAAAATAAAAAGGGTTACTTCAAGTTAGTTGAAGATTATGAAGGATATTTAGAAGAC AAAGAAAAGGAAAGAGTACAAAATTAG Protein sequence : MDFIIYIWEFFQNNILTKPAFFIGFIVLIGYLLLKRPFYDALAGFIKATVGYLILNVAAGGLVSNFRPILAGLKDRFNLQ AAVIDPYFGQTAAQEAIGNIGKSFSMMMVVLLIAFLFNLVLVLLRKFTKVRTVFITGHVMVQQSATALWLVFFCFPNLSN MGVVVMLGLLLGTYWAVFSNLTVEPCQDLTEGGGFAIGHQQMLGVWITDKIAGKIGNSKKSIEDLELPGFLSIFSDNVVA TGILMTVFFGIIMGILGPDLMHTIDKGFDQNTNFLFYILEKSLNFAVYLSILQMGVRMFVSELTESFQGISNKILPGSVP AVDCAATYGFGHPNAVTIGFLFGAVGQFIAIIGLVVFQSPVLIISGFVPLFFDNATFAVFANRKGGLKAAMIIPFVSGVI QVLGGAFAAYYFGLAQFGGWHGNFDWDTLWPVVGVLMDKFAYVGVGIAVVGMLLIPQIQYFKNKKGYFKLVEDYEGYLED KEKERVQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ulaA | YP_281512.1 | PTS system ascorbate-specific transporter subunit IIC | Not tested | Not named | Protein | 1e-92 | 53 |
