|
Name : CPF_0595 (CPF_0595) Accession : YP_695048.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Virulence Product : sugar transferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 717912 - 718574 bp Length : 663 bp Strand : + Note : identified by similarity to GB:AAD22526.1; match to protein family HMM PF02397 DNA sequence : ATGCAAAACATAAATGATATTCCAATTAAATCAGAGTGTAGTAAGGAAAAAAGCTATCTATTTTATAATGTTGCAAAAAG ATGTTTTGACTTAATATGTTCGTTAATTGCGTTAATATTATTTTCACCAATATTTTTGATTTTATATATATGGGTGAAGG TTGATTCTAAAGGACCAGCATTTTTTGGGCATAAAAGAATTGGTAAAGACAGAAAATATATAGATGTTTATAAATTTAGA TCTATGGTTTCTAATGCAAAAGAGGTGTTTGATAATTTTACACCAGAGCAAAAAGCTGAATTTGAAAAGAATTTCAAGTT AGATGATGATCCAAGAATAACTAAATGTGGAGCTTTTTTAAGAAAGACAAGTTTAGATGAATTACCTCAATTAATAAATA TTATTAAAGGAGATATGAGCATTGTTGGACCAAGACCAATAGTAGATAAAGAAGTTGAAAAGTATGGTGAATATGCAGAC AAGCTTTTCAGTGTTACACCAGGATTAACTGGTTATTGGCAAGCAAATGGAAGAAGTGACACAACATATGAAGAAAGAGT ACAAATGGATATGTACTATATAGATAATAGATCTTTATGGCTTGATATTAAAATAATATTTAAGACGGTTATATCAGTTA TAAAAAAAGAAGGAGCTGTATAG Protein sequence : MQNINDIPIKSECSKEKSYLFYNVAKRCFDLICSLIALILFSPIFLILYIWVKVDSKGPAFFGHKRIGKDRKYIDVYKFR SMVSNAKEVFDNFTPEQKAEFEKNFKLDDDPRITKCGAFLRKTSLDELPQLINIIKGDMSIVGPRPIVDKEVEKYGEYAD KLFSVTPGLTGYWQANGRSDTTYEERVQMDMYYIDNRSLWLDIKIIFKTVISVIKKEGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-28 | 43 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 9e-30 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPF_0595 | YP_695048.1 | sugar transferase | VFG1369 | Protein | 1e-22 | 43 |
