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Name : CPF_0421 (CPF_0421) Accession : YP_694878.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : oligo-1,6-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 503188 - 504852 bp Length : 1665 bp Strand : + Note : identified by similarity to SP:P29094; match to protein family HMM PF00128 DNA sequence : ATGAATAAAAAGTGGTGGAAAGAATTAATTGCTTACCAGATTTATCCTAAGAGCTTTATGGATTCTAATGGTGATGGTAT AGGTGATATTCAAGGGATAATATCTAAATTAGATTATTTAAAAGATTTAGGTATTGATTTAATCTGGCTATGTCCAATGT ATAAATCACCAAATCATGATAATGGTTATGACATTAGTGATTATAAAGATATCTTAGATGAATTTGGAACTATGGATGAT TTTAATGAATTGCTTAGTGAGGTTCATAATAGAGGGATGAAACTTATTATAGATTTAGTAATAAATCATACTAGTCATGA ACATCCATGGTTTATAGAATCAAGAGCTTCTAGGGATAATCCTAAAAGAGATTGGTATATTTGGAGAGAAGGTAAAGGGG ATGAGGAACCAAATAACTGGGAAAGTATATTTAAAGGTTCAGCTTGGGAATTCTGTGAGAATAGTGAAGAGTATTACCTG CATTTATTTGCTAAAGAGCAACCAGATTTAAACTGGGAGAATAAAGAGGTAAGAAATGAACTATATAAGATGATAAACTG GTGGCTTGATAAGGGTATTGATGGGTTTAGAGTTGATGCCATAAGTCACATAAAAAAAGAAGAGGGTCTTAAGGATATGG ATAATCCAGAGGGACTTAAATATGTTTCATCCTTTGAAAAACATATGAATGTAGAGGGAATAAATTCTCATCTTAAGGAA CTAAAAGAAGAAACTTTTTCAAAGTACGATATAGTTACCGTTGGAGAAGCAAATGGAGTTAGTGCCAATGAAGCTGATCA CTGGGTAGCTGAAGATGAGGGGACATTTAATATGATATTCCAATTTGAGCATCTTAATCTTTGGAATTATGAAGAGGGAC AAGGATTTGATGTGAAGGCATACAAAGATGTTTTAACAAATTGGCAAAATTCTTTAGAAGGTAAAGGATGGAATGCACTT TTCATTGAAAATCATGATATACCTAGAGTTGTTTCAACTTGGGGAAATGACAAGGAATATTTAACTGAATGTGCAAAAGC TTTTGGAGCAATTTATTTCTTACAAAAGGGAACCCCTTTCATATACCAAGGGCAAGAACTTGGTATGACAAATGTTAAAT ATCATAGCATATCTGAGTATGATGATGTTAAAACTATAAATACTTACAATGAAAGAATTGAAAGTGGTGTTTCAGAGGAA ATAGCATTAAAAGAAGCTTGGGTAACTTCAAGAGATAATTCAAGAACACCTATGCAATGGAATTCAAGTGAGAATGCAGG GTTTACTTGTGGAAAACCTTGGATAGGAGTTAATGAAAATTATAAAACAATAAATGTAGAAGTTGAAGAAAGGGATGAAA ATTCAGTTTTAAACTTCTATAAAAAGCTTATAAAACTTAAAAAGTCTAATGAAGCTTTAATCTATGGTGTATATGATTTA ATCCTTGAAGAGGATGAAAATATCTTTGCTTATACAAGAACTTTAAATAATGAAAAGTTCTTGATAATGGCTAATTTAAC TGGAGAAAATGCCAAGTACATGTATGAGAAAGAAAAACTTAATTCTAAGGATTTAATTCTTAACAATTATGAGGTTTGTG AACATAAAAACTTAACAGAGTTTACATTAAAACCTTATGAATGCAGAGTATATAAGCTTTCTTAA Protein sequence : MNKKWWKELIAYQIYPKSFMDSNGDGIGDIQGIISKLDYLKDLGIDLIWLCPMYKSPNHDNGYDISDYKDILDEFGTMDD FNELLSEVHNRGMKLIIDLVINHTSHEHPWFIESRASRDNPKRDWYIWREGKGDEEPNNWESIFKGSAWEFCENSEEYYL HLFAKEQPDLNWENKEVRNELYKMINWWLDKGIDGFRVDAISHIKKEEGLKDMDNPEGLKYVSSFEKHMNVEGINSHLKE LKEETFSKYDIVTVGEANGVSANEADHWVAEDEGTFNMIFQFEHLNLWNYEEGQGFDVKAYKDVLTNWQNSLEGKGWNAL FIENHDIPRVVSTWGNDKEYLTECAKAFGAIYFLQKGTPFIYQGQELGMTNVKYHSISEYDDVKTINTYNERIESGVSEE IALKEAWVTSRDNSRTPMQWNSSENAGFTCGKPWIGVNENYKTINVEVEERDENSVLNFYKKLIKLKKSNEALIYGVYDL ILEEDENIFAYTRTLNNEKFLIMANLTGENAKYMYEKEKLNSKDLILNNYEVCEHKNLTEFTLKPYECRVYKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-119 | 47 |
