|
Name : dnaB (CPF_2970) Accession : YP_697324.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3232838 - 3234172 bp Length : 1335 bp Strand : - Note : unwinds double stranded DNA DNA sequence : ATGGAAGCACCAGTAATGAAGAGTTTGCCACAAAGTATAGAAGCGGAACAATCTGTTTTAGGGGCAATGATAATAGATAG AACAACCATAGCTCAAGCCGCTGAGGTTTTAAACAAGGATTCATTTTATAGAGATGCTCATAAGGTAATATTTCAAAGTA TAATAGAAATGTACCAAAGAGATCAAGCTGTAGACCAATTAACTCTTTTAGAGTATTTAAAATCTACTGATAGACTTGAA AAAGCCGGTGGTATAAGTTATGTAACAGAGATAAGTGCATCTGTACTTAGTACAGTTAACATAAAATCATACATAAAAAT AGTTGATGAAAAAGCTATGCTTAGAAGACTTATAAAATCTTCTACAGAAATTATAGAGAATTGTTATAACAATCAAGAAG ATGTTGAAAAAGTTATAGATTCAGCAGAGAAGAAAATATTTGATTTATCTGAAAAGAGATCATCAAATGATTTTGAACCT TTAAGTGTTGTTCTTGAAAGAGGTTTTGAGCAAATAGAGGCTATATTTAATAATGAAGGAGAACTTACAGGTGTTGGTTC TGGATTTAAAGACTTGGATGAGATGACCTCTGGATTCCAAAAGGGTGATATGGTGCTTATAGCAGCAAGACCATCTATGG GTAAAACAACCTTTGCTCTTAACATAGCAGAACATGCTGCCTTAAGAGAGGGAAAGAGTGTTGTTATATTCTCTTTGGAA ATGTCAAAGGAACAGCTTGCATATAAGTTATTATGTTCAGAGGCTAATGTAGATATGTTAAGTCTTAGAACAGGTAAATT AACTCCTGAGGATTGGGACAATATAGCTAGAGCATCAGGCCCACTAGCATCAGCTAAGATATACATAGATGATACTGCTG GGGTTTCTGTAATGGAAATGAGATCTAAGTGTAGAAGATTAAAAATGGAATATGGAATAGATCTTATACTTATAGACTAC TTACAACTTATGAGTGGAAGTGGTGAAAGTAGACAACAAGAAGTTGCGGAGATTTCAAGAAATATAAAAGCTATAGCTAA GGAAATGGAATGTCCAGTTATAGCCTTATCTCAGCTTTCTCGTGCTCCAGAGCAAAGAGCAGACCATAGACCTATGTTAT CTGACCTTAGAGAATCTGGATCAATAGAGCAGGATGCTGACCTTGTTATGTTCTTATATAGAGATGAGTACTATAACAAG GAAACAGAAGATAAAAATGTTGGAGAATGTATAATAGCTAAGCAGAGAAACGGTCCAGTTGGAACAGTTAAGCTTGCATG GCTTGGTCAATACAGTAAATTTGCAGATTATGAAGCTATTCATAAGGATGTTTAA Protein sequence : MEAPVMKSLPQSIEAEQSVLGAMIIDRTTIAQAAEVLNKDSFYRDAHKVIFQSIIEMYQRDQAVDQLTLLEYLKSTDRLE KAGGISYVTEISASVLSTVNIKSYIKIVDEKAMLRRLIKSSTEIIENCYNNQEDVEKVIDSAEKKIFDLSEKRSSNDFEP LSVVLERGFEQIEAIFNNEGELTGVGSGFKDLDEMTSGFQKGDMVLIAARPSMGKTTFALNIAEHAALREGKSVVIFSLE MSKEQLAYKLLCSEANVDMLSLRTGKLTPEDWDNIARASGPLASAKIYIDDTAGVSVMEMRSKCRRLKMEYGIDLILIDY LQLMSGSGESRQQEVAEISRNIKAIAKEMECPVIALSQLSRAPEQRADHRPMLSDLRESGSIEQDADLVMFLYRDEYYNK ETEDKNVGECIIAKQRNGPVGTVKLAWLGQYSKFADYEAIHKDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-82 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-72 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-72 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-74 | 41 |
