Gene Information

Name : CPF_0283 (CPF_0283)
Accession : YP_694743.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 338214 - 338558 bp
Length : 345 bp
Strand : +
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGAATAAAATAGTTTTATTAGGACGTTTAGTAAAGGATCCAGAGTTAAGATATGTAGAGGGTGGGGAGAAGGTATATAC
AAAATTCACAATTGCTGTGGCAAGAAATTTTAAATCTTCCACAGGAGAAAGAAAAAAAGATTTTATTCCAATAATAATGT
GGGAGAAAAAAGCAGAGATAGCTTGTAAATATCTAAAAAAGGGAGATCTTTTAAGTGTTAGTGGAAGACTTATAACAAGA
AGCTTTGAAGATACTGAAGGGAAGAGAAGATATATTGTAGAAGTATCTGTAGAAGATTTTAAATGTGTTAATTTTAATCA
TGATAGAGTAGATAATAACTTTTAA

Protein sequence :
MNKIVLLGRLVKDPELRYVEGGEKVYTKFTIAVARNFKSSTGERKKDFIPIIMWEKKAEIACKYLKKGDLLSVSGRLITR
SFEDTEGKRRYIVEVSVEDFKCVNFNHDRVDNNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-16 47
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-19 46
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-19 46
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 7e-19 45
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-19 44