Gene Information

Name : CPF_2819 (CPF_2819)
Accession : YP_697183.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : NupC family nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 3080537 - 3081763 bp
Length : 1227 bp
Strand : +
Note : identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804

DNA sequence :
GTGGATAGGTTTATTGGTGTAATCGGTCTTATTTGTATTATTGGTATAGCTGTTCTTTTTTCTGAAAACAGAAAGAAGAT
CAACTGGAGATTGGTTGGAACAGGTCTTTTATTACAAATTATTTTCGCTTTATTAATCCTAAAAGTTCCTGCCGGTAGAG
CAGTATTTGAATGGATTAGTAGCGGAATAACTAAGTTATTAGATTTTACTAAAGAAGGTAGTTCATTCTTATTTGGATCA
TTACTTGATACAGACAAATTCGGTGTAATATTTGCTCTACAAGTATTACCAACTATTATCTTCTTCTCATCATTAATGAG
TGTACTTTATCATTTAGGTATAGTTCAAGTAGTAGTTAAAGTTATTGCTAAGGGTGTTGCTAAAGTATTAGGAACAAGTG
GTGCTGAAACTTTCAGTGCAGTTGGTAATATCTTTTTAGGTCAAACAGAGGCTCCTCTACTAGTTAAACCATACATAAAG
AACATGACTAGATCAGAAATATGTGCAATCATGATAGGTGGTATGGCTACTGTTGCCGGTGGTGTTATGGCTGGTTATGT
AGCTATGGGTGTTAACGCTGGTAACTTATTAGCAGCATCAATCATGGCAGCCCCTGCTGGATTAATATTAGCTAAAATAT
TAGTTCCTGAAACTGAAGTTCCTGAAACTAAAGGTGGCGCAACTTTAGAACTTAAAGTTGAAAGTGAAAATGTTATTGAA
GCTGCTGCAAACGGTGCTTCAGAAGGTTTAGGATTAGCTTTAAACGTTGGTGCTATGCTTCTTGCATTCGTTGCTCTTAT
AGCTATGATCAATGCTTTATTTGGAGCAATTGGTGGAATATTTGGTGCACCTTGGTTAAGCTTAAACTGGATTCTTGGTA
GATTATTCTCTCCATTAGCATTTATAATGGGAGTTCCAACTAAAGACGTTTTCGCAGCTGGAGACTTACTAGGAATTAAA
TTAGCAGTTAATGAATTCTTAGCTTACTCACAATTATCAAACTACATAGCAAGCGGAACTTTAGAACCTAAGACTATAAT
GATATTAACTTATGCTCTTTGTGGATTCGCTAACTTAAGTTCAGTTGCTATACAATTAGGTGGTATCGGTGGATTAGCTC
CAGAAAAGAAACCAACTATAGCTAAGTTAGGATTCAAAGCACTTTTAGGTGGTGTATTAGCTACTTGTATGACAGCTACT
ATAGCAGGTATCTTATTTAGTGCTTAA

Protein sequence :
MDRFIGVIGLICIIGIAVLFSENRKKINWRLVGTGLLLQIIFALLILKVPAGRAVFEWISSGITKLLDFTKEGSSFLFGS
LLDTDKFGVIFALQVLPTIIFFSSLMSVLYHLGIVQVVVKVIAKGVAKVLGTSGAETFSAVGNIFLGQTEAPLLVKPYIK
NMTRSEICAIMIGGMATVAGGVMAGYVAMGVNAGNLLAASIMAAPAGLILAKILVPETEVPETKGGATLELKVESENVIE
AAANGASEGLGLALNVGAMLLAFVALIAMINALFGAIGGIFGAPWLSLNWILGRLFSPLAFIMGVPTKDVFAAGDLLGIK
LAVNEFLAYSQLSNYIASGTLEPKTIMILTYALCGFANLSSVAIQLGGIGGLAPEKKPTIAKLGFKALLGGVLATCMTAT
IAGILFSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 6e-43 43