Gene Information

Name : rph (CPF_2536)
Accession : YP_696926.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2791330 - 2792076 bp
Length : 747 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGAAGTAGTGGAAGAAAAAAAGAACAGATAAGACCAGTTAAAATAACAAGAAACTTTACTAAATATGCAGAAGGCTC
TGTATTAATAGAAGTTGGGGATACTAAAGTATTATGTACTGCTTCAATAGAAGAGAAAGTTCCACCTTTTTTAAAGGGTT
CTGGAGAAGGATGGATAACTGCTGAATATAACATGCTTCCAAGAAGTACTCAAAGTAGAAAACAAAGAGAGATAAATAAA
CTTAAAATAGATGGAAGAACAATGGAAATACAAAGACTTATAGGAAGAGCTCTTAGATCAGCTGTAGATATGAAAGCTTT
AGGAGAAAAAACTATTTGGATAGACTGTGATGTTCTTCAAGCTGATGGAGGAACTAGAACGACTTCTATTACAGGTTCAT
TTGTGGCATTGGTTGATGCTGTAAATAAACTTCATCAAAAGAAACCTTTCAATGTTTATCCTATAAGACATTTTGTCAGC
GCAGTAAGTGTTGGAATAGTAGGGGAAGAGAAAGTATTAGACTTATGCTATGAAGAAGACCATGTAGCTAAAGTAGATAT
GAATGTTGTAATGACAGAAGAGGGAGAATTTATAGAAATTCAAGGAACTGGAGAGGCTGGACCTTTTTCAAGAAAAGAAT
TAGATGAATTATTAAATCTTGCTGAAAAGGGAGCAAAACAAATGATACAAGCACAAAAAGATGCTTTAAAGACAGATTCT
TTATGGATCGGAACAGGGAGAGAGTAA

Protein sequence :
MRSSGRKKEQIRPVKITRNFTKYAEGSVLIEVGDTKVLCTASIEEKVPPFLKGSGEGWITAEYNMLPRSTQSRKQREINK
LKIDGRTMEIQRLIGRALRSAVDMKALGEKTIWIDCDVLQADGGTRTTSITGSFVALVDAVNKLHQKKPFNVYPIRHFVS
AVSVGIVGEEKVLDLCYEEDHVAKVDMNVVMTEEGEFIEIQGTGEAGPFSRKELDELLNLAEKGAKQMIQAQKDALKTDS
LWIGTGRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-62 58