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Name : CPF_2426 (CPF_2426) Accession : YP_696847.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : RNA-binding protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2698353 - 2700515 bp Length : 2163 bp Strand : - Note : identified by match to protein family HMM PF00575 DNA sequence : ATGGACAATATAAATCATATTTTATCAAAGGAACTTGGTATTTCATTAAAACAGGTAACAAGCGTTATAGAAATGTTAGA TGAAGGAAATACAGTACCTTTCATAGCTAGATATAGAAAAGAAAGAACTGGTGGATTAACAGATGAGGTTCTAAGAAAAT TTAATGAGAGATTAACATATTTAAGAAATTTAGAAAGTAGAAAAGAAGATGTTTTAAGAATAATAGAGGAGCAAGAAAAA TTAACTCCAGAATTAAAACTAAAAATTGAGAAAGCTACTACCCTTACTGAGGTTGAAGATATATATAGACCTTTTAAAGC TAAAAAGAGAACAAGAGCTACTATGGCTGTTGAAAAAGGATTAAAGCCATTAGCAGAGCTTATTCTATCAGGAGAGTTTA ATGGTGATATAGTAGAAGAGGCTAATAAATATATTAATGAAGAAAAAGGTGTTAAAAATGAAGAGGAAGCTCTTCAAGGG GCTATGGATATTATAAGTGAAATAATATCTGATAATGCTGATTATAGAAAATGGATTAGAAATTTTGTTCAAAAGGATGG AATAATTCAGGTAAAGGGAAGCAGTGAAGAACAAACACCTTATGAAATGTATTATGATTATAAGGAGCCTGTTAGAACAA TTCCATCTCATAGAATATTAGCTATAAATAGAGGAGAAAAAGAAAAAATTCTTTCAGTTAAAGTAACTTGTAATGATGAT ATAATTATAGATTATTTAAATAAAAAAGTTTTAAAGGGAAATAAAATTACTGATAAGTATTTAGAAGAAAGTATAAAGGA CTCCTTTAAAAGACTTATATATCCTTCAATAGAAAGGGAAATAAGAAGTGAATTAACCTCTAAGGGAGAAGAGGGAGCAA TTGATATATTTAAGGCTAATTTAAAAGCTCTCTTAATGCAAGCTCCTATTAAGGGAAAAGTTGTAATGGGATTTGACCCT GGATTTAGAACTGGATGTAAGGTAGCAATCTTAGATGAAACAGGAAAATTTGTTGAGAATACAACAGTTTATCCAACAGC CCCTCAAAATAGAATTGATGAAACAATAAGTACACTTAAAAAACTTATTAAAAAACATGGAGTTCAAGTTATTTCTTTAG GAAATGGAACAGCTTCAAGAGAATCAGAAGAAGTAATTGCAAAGATGCTTAAGGAAATAAAAGAGGAAACAGGAAAAGAA TTATTTTATGTTATAGTTTCTGAGGCAGGTGCTTCTGTTTATTCAGCATCAGAACTTGCAAATAAGGAATATCCAGACTT AGATGTAACTGTAAGAGGAGCAATTTCTATAGGAAGAAGACTTCAAGATCCATTAGCTGAGCTTGTTAAAATAGATCCTA AGGCTATAGGAGTAGGACAATATCAACATGATGTAACTCAGAAAAAACTTGATGAATCCTTAGCAGGGATAGTTGAGGAT TGTGTTAATAATGTAGGAGTAGATTTAAATATAGCAACTCCATCATTATTAAGTTATATTTCAGGGATAAATGCTTCAAT AGCTAAAAATATTGTTGATTATAGAGAAGAAAATGGTAAGTTTAAAAGTAGAAAAGAGCTTTTAAAAGTTAAAAGATTAG GACAAAAAGCTTATGAACAATGTGCAGGATTCTTAAGAGTTATGGAAAGCAAAGAAGCTTTAGATAATACTTCAGTTCAT CCAGAGTCATATAAAGTAGCTAAGGAACTTATAAAAACTTTAGGATATACAGAAGAAGATTTAAAAAATGGCAAATTAGT AGATATAGATGAGAGAGTAAAAGCAAAAGGAATTTCTAACTTAGCAAAAGAATTAGAAGTTGGAGAACCAACACTTAATG ATATTATAAAGGAAATTAAAAAGCCTGGAAGAGATCCAAGAGAGGAATTACCTAAACCAATATTTAAGTCTGGCGTAATA GAAATGAAAGATTTAAAACCAGGTATGATTTTAATGGGGACAGTTAGAAATGTATCTGATTTTGGTGCTTTTGTAGATAT TGGAGTTCACCAAGATGGATTAGTTCATAAGAGCCAAATGGCAGATAGCTTTGTTAAACATCCACTTGATATAGTTAAGG TTGGAGATGTTGTAGAAGTTAGAATATTAGATGTTGATTTAAAAAGAAAGAGAATTTCATTATCAATGAAAAAAGAAGGT TAA Protein sequence : MDNINHILSKELGISLKQVTSVIEMLDEGNTVPFIARYRKERTGGLTDEVLRKFNERLTYLRNLESRKEDVLRIIEEQEK LTPELKLKIEKATTLTEVEDIYRPFKAKKRTRATMAVEKGLKPLAELILSGEFNGDIVEEANKYINEEKGVKNEEEALQG AMDIISEIISDNADYRKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDYKEPVRTIPSHRILAINRGEKEKILSVKVTCNDD IIIDYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIEREIRSELTSKGEEGAIDIFKANLKALLMQAPIKGKVVMGFDP GFRTGCKVAILDETGKFVENTTVYPTAPQNRIDETISTLKKLIKKHGVQVISLGNGTASRESEEVIAKMLKEIKEETGKE LFYVIVSEAGASVYSASELANKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLAGIVED CVNNVGVDLNIATPSLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKAYEQCAGFLRVMESKEALDNTSVH PESYKVAKELIKTLGYTEEDLKNGKLVDIDERVKAKGISNLAKELEVGEPTLNDIIKEIKKPGRDPREELPKPIFKSGVI EMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQMADSFVKHPLDIVKVGDVVEVRILDVDLKRKRISLSMKKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-160 | 48 |
