|
Name : pyk (CPF_2404) Accession : YP_696827.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Virulence Product : pyruvate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0469 EC number : 2.7.1.40 Position : 2674816 - 2676240 bp Length : 1425 bp Strand : + Note : identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 DNA sequence : ATGCAAAAAACAAAAATGATATTTACAATTGGTCCTGCAAGTGATTCAGAAGAAATTCTAAGAGAGTTCATAAGAATTGG TATGAATGCAGCTAGATTAAACTTCTCACATGGAGACCATGCAAGTCATAAAGAAAAGATAGAACTTATTAAGAGACTTA GAAAAGAAGAAAAATCAGCTACAGCTATCTTATTAGACATTAAGGGTCCTAAAATAAGAACACATAATTTTAAAAATGGC GAAGCTGAATTAAAAAATGGTGATGAATTCACATTCTCTTGCGGAGATGAAATATTAGGTGATAACACTAAATGTTCAAT CTCTTATAAAGAACTATATGAAGACATAAAACCTGGTGGATCAATACTTGTTGATGATGGACTTTTAGAATTTAAAGTAA AGGAAGTCCGTGGAACTGATATAATATGTGAAGTTATTGAAGGAGGTACTATAAAAGACCATAAAGGTGTAAATGTACCT AATGTACCAATCAAACTCCCTGCAGTAACTGAAAAGGATAGATCTGACTTAATATTTGGTTGCGAAATGGAAGTAGACTT TGTAGCAGCTTCTTTCATAAGAAAACCTGAGGATGTACTTGAAGTTAGAGAAATTCTAGACTCTCATGGTGGAAAAGATA TAAAAATAATATCAAAAATAGAAAGCCAAGAAGGTGTAGATAACATAAAAGAAATAATTAAGGTTACTGATGGTGTAATG GTTGCTAGAGGTGATATGGGAGTAGAAATTCCTATAGAAAATGTACCTATAATTCAAAAAAATATAATTAAGAAATGTAA TCAAGCAGGGAAAATAGTTATAACGGCAACTCAAATGTTAGATTCTATGATAAGAAATCCAAGACCTACTAGAGCTGAAG CTTCTGACGTATGTAATGCCATATTTGATGGTACAGATGCCATAATGCTTAGTGGAGAAAGTGCTTCTGGTAGCTTCCCT ATAGAGGCAGCAATGACAATGTCTAGAATAGCAAAAAAAGCAGAAGCTAACTTAGACTATAATTATCTTTTAAGAAGATT AAAGGATCCAAATCCAAATCCAGATGCCTTTGCAGATGCCATAAGTTATTCAGCATCAAAAACAGCTAGCAAATTCCCTA CAAAAGCTATAGTAGCAGCCACTCAGACTGGTTCAACAGCTAAGATATTATCAAAATATAAACCTAGCTGTCCAATAATA GCTATTACTCCATATGAAAAAGTTAGAAGAAGCCTAGCTTTAAACTTTGGAATAATTTCTAAGAAATGCGCTTATTTTAA TAGCACAGATGAGATCATAGAGGAAGCTAGAAAAGTAGCTAAAGAATTCCAAATAGCTGAAACTGGAGATAATATAATGG TAGCTGCTGGGTTCCCAACATCAATAACTGGTGGAACAAACATGCTAAAAATTGAAAAAATATAA Protein sequence : MQKTKMIFTIGPASDSEEILREFIRIGMNAARLNFSHGDHASHKEKIELIKRLRKEEKSATAILLDIKGPKIRTHNFKNG EAELKNGDEFTFSCGDEILGDNTKCSISYKELYEDIKPGGSILVDDGLLEFKVKEVRGTDIICEVIEGGTIKDHKGVNVP NVPIKLPAVTEKDRSDLIFGCEMEVDFVAASFIRKPEDVLEVREILDSHGGKDIKIISKIESQEGVDNIKEIIKVTDGVM VARGDMGVEIPIENVPIIQKNIIKKCNQAGKIVITATQMLDSMIRNPRPTRAEASDVCNAIFDGTDAIMLSGESASGSFP IEAAMTMSRIAKKAEANLDYNYLLRRLKDPNPNPDAFADAISYSASKTASKFPTKAIVAATQTGSTAKILSKYKPSCPII AITPYEKVRRSLALNFGIISKKCAYFNSTDEIIEEARKVAKEFQIAETGDNIMVAAGFPTSITGGTNMLKIEKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY1744 | NP_456147.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 6e-92 | 48 |
| pykF | YP_216386.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 5e-92 | 48 |
| pykF | NP_805051.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 5e-92 | 48 |
| pykF | CAA68205.1 | pyruvate kinase like protein | Not tested | SPI-2 | Protein | 5e-91 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pyk | YP_696827.1 | pyruvate kinase | VFG0479 | Protein | 2e-92 | 48 |
