Gene Information

Name : CPF_2349 (CPF_2349)
Accession : YP_696772.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2614061 - 2614798 bp
Length : 738 bp
Strand : -
Note : identified by similarity to SP:P54954; match to protein family HMM PF00005

DNA sequence :
ATGATAAAGGTTAAAAATCTTAAAAAGAGTTATAAAAATTTAGAAGTTTTAAAAGATGTTAACATGGAAGTTAAACAAGG
TGAGGTAGTTGTTATAATAGGACCTTCAGGTTCAGGTAAGTCAACTTTCCTAAGATGTTTAAATTATTTAGAATCACCAG
ATAAGGGAGAAATCCAAGTTGGTCATGTGAAAGTAAATGCTGAAAAAATAAGTAAAAAAGAAATTAATGACTTAAGAAAA
CAATCAGCAATGGTATTTCAGCATTATAATTTATTCAACAACAAAACAGTTCTACAAAATGTTACGGAAGCATTGATTGT
AGTAGAAAAAATGGATAAGAAAAAGGCAGAAGAAATTGCCTTAGAAAATTTAAAGAAGGTAGGTATGGTTGATAAAAAGG
ATAATTATCCAAATACCTTATCAGGAGGACAAAAACAAAGGGTTAGTATAGCGAGAGCTATGGCTATAAATCCCAATGTT
ACCCTTTTTGATGAACCTACATCAGCCTTAGATCCAGAATTGGTAGCAGAAGTATTAGCTGTTATAAAAGATTTAGCTAA
GGAACATAAAACAATGATAATAGTTACCCATGAAATGAGTTTTGCAAGGGATGTAGCAGATAGAGTTGTATTTATGGATG
GAGGAATAGTTTTAGAAGAAGGTACTCCAGAGGAAATTTTTAAAAATCCTAAAAATGAAAGAACAAAACAGTTTCTTGAA
AGATTTATAGTTAATTAA

Protein sequence :
MIKVKNLKKSYKNLEVLKDVNMEVKQGEVVVIIGPSGSGKSTFLRCLNYLESPDKGEIQVGHVKVNAEKISKKEINDLRK
QSAMVFQHYNLFNNKTVLQNVTEALIVVEKMDKKKAEEIALENLKKVGMVDKKDNYPNTLSGGQKQRVSIARAMAINPNV
TLFDEPTSALDPELVAEVLAVIKDLAKEHKTMIIVTHEMSFARDVADRVVFMDGGIVLEEGTPEEIFKNPKNERTKQFLE
RFIVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 5e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPF_2349 YP_696772.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-31 41