|
Name : CPF_0222 (CPF_0222) Accession : YP_694685.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : glycerol-3-phosphate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 271479 - 272816 bp Length : 1338 bp Strand : - Note : identified by match to protein family HMM PF07690; match to protein family HMM TIGR00881 DNA sequence : ATGTTTGGATTTTTTAGCCCAGCTCCAGCAATACCTAGACTTCCAAAAGATAAGGTATCATCAGCATACAAAGCATATCG TATTCGTATGTTCCTTATGATATTTATTGGATATACAGGTTACTACTTAGTTAGAAAAAACTTTGCTGTAGCATCACCAT ATTTAATTGATAACTATGGATTTTCAAAAACACAAATCGGACTTATAAGTATGGGACTTGCTGTATCTTACGGTTTAAGT AAGTTCATTTTAGGAAATTTATCAGACAAATCAAACGTAAAGAAATTTATATGTTTTGGACTTATTGCATCATCAGTATT AAGTGTTCTAATGGGATTTGCTCGTACAGTTCCAATATTCTTAATACTTATGGTATTTAACGGATTCTTCCAAGGTATGG GAGCTCCACCATGTTCAATAGTATTAGGTAAATGGTTCTCTCAAAAAGAAAGAGGACTTAAAATGGGAATATGGAATACT TCTCATAATATAGGTGGAGGTTTAATCGCCCCTATAGCAACTTTATGTTTATTAATATTTGGACAAAATCATTTCCAATC AATATTCTTTGTACCAGCAATAATATGTACAATAGTAGCTTTATTCTGTTATGTAATTGGAGCTGATACTCCAGCATCTG TTGGATTACCTCCAGTTGAAGAATATAGAAATGATTATCCTGAAGTTAAGGCTGAGGTTAATCCAACAACTTTATCTTCA AAAGAAATAATGGTTAAATATGTTCTTAAAAATAAATATGTTTGGTACTTAGCACTAGCTAATATCTTTGTTTATTTAAT AAGACAAGGTGTTGTTAACTGGATTCCTATATACTTAAAAGAATCAAAAGGATTCTCTGCTGCTAATGCAAACTGGGCAA TGTTCTTATTTGAATATGCTGCAATACCAGCATCAATATTACTTGGATGGCTTTCAGACGTTGTATTCAAAGGAAAGCGT GCTCCACTTAGTATCTTATGTATGATCGGTGTTATATTTGCTACAGTAGCTTACTGGCAAACAAGCAGTACATTAGTAAC AATGATTTCTGTTGCATTTATAGGATGCTTCATATACGGACCTCAATTATTAATAGGAATGAACTTAATAGACGTTGTAC CTAACTTCGCTGTTGGTTCTGCTACAGGTTTCTCAGGACTTTGCGGATACCTTCTTGGTGAATTCATGGCTGACTTCGTT TTAGGTATGATAGCTGATAGCTTTGGATGGAACGGTGCATTCATATTTATCATAGTAGGTGCATTCATTGCATTACTTCT TTTAGCTTTAACTTTAAAGATAAAGAAAAATCCACAAGTTGAAGATAAGATAGCTTAA Protein sequence : MFGFFSPAPAIPRLPKDKVSSAYKAYRIRMFLMIFIGYTGYYLVRKNFAVASPYLIDNYGFSKTQIGLISMGLAVSYGLS KFILGNLSDKSNVKKFICFGLIASSVLSVLMGFARTVPIFLILMVFNGFFQGMGAPPCSIVLGKWFSQKERGLKMGIWNT SHNIGGGLIAPIATLCLLIFGQNHFQSIFFVPAIICTIVALFCYVIGADTPASVGLPPVEEYRNDYPEVKAEVNPTTLSS KEIMVKYVLKNKYVWYLALANIFVYLIRQGVVNWIPIYLKESKGFSAANANWAMFLFEYAAIPASILLGWLSDVVFKGKR APLSILCMIGVIFATVAYWQTSSTLVTMISVAFIGCFIYGPQLLIGMNLIDVVPNFAVGSATGFSGLCGYLLGEFMADFV LGMIADSFGWNGAFIFIIVGAFIALLLLALTLKIKKNPQVEDKIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glpT | YP_005684639.1 | Glycerol-3-phosphate transporter | Not tested | PiCp 3 | Protein | 3e-58 | 41 |
