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Name : nifJ (CPF_2318) Accession : YP_696741.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Virulence Product : pyruvate-flavodoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 2570072 - 2573587 bp Length : 3516 bp Strand : - Note : identified by similarity to SP:P19543; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02780; match to protein family HMM TIGR02176 DNA sequence : ATGGCAATGAGAAAAATGAAAACTATGGATGGTAACACAGCTGCCGCTTATATATCATATGCGTTCACTGATGTTGCAGC AATATTCCCTATCACTCCATCATCACCAATGGCAGAGTGGGTTGATGAAAACAGTGCAAGAGGATTAAAGAACATATTTG GTCAACCTGTAAAAGTAATGGAAATGCAATCAGAAGCAGGTGCTGCTGGAGCAGTTCACGGTTCATTACAAGCTGGAGCT TTAACTACTACTTACACAGCTTCACAAGGTTTATTATTAATGATACCAAACATGTACAAAATAGCTGGTGAATTATTACC ATCAGTATTCCATGTATCAGCTAGAGCATTAGCTACTTCAGCATTAAACATCTTCGGTGATCACCAAGACGTTATGGCTG CAAGACAAACTGGATTCGCTATGTTAGCAGAAGGATCAGTTCAAGAGGTTATGGATTTATCAGCAGTTGCTCACTTAGCA GCTCTTAAAGCTAGAATACCTTTCGTAAACTTCTTCGATGGATTCAGAACATCACATGAAATACAAAAAGTTGAACTTTT ACAATACGATGAATTAAAAGAATTAGTAGATATGGAAGCTGTAGAAGAGTTCAGAAGAAGAGCTCTTAACCCTAACAAGC CTGTTACAAGAGGTACAGCTCAAAACCCAGACATCTACTTCCAAGAAAGAGAAGCAGTAAACAAATTCTACGATGCAGTT CCAGAAATAGTTGAGAGCTACATGAAAGAAATCACTAAGTTAACTGGTAGAGAGTACAACTGTTTCGATTACTATGGAGC AGCAGATGCTGAAAGAGTTATCGTAGCTATGGGATCAGTTACTGACTTAATAGAAGAAACTGTAGACTACTTAAACGCTA AAGGAGAAAAAGTTGGTTTAATCAAAGTAAGATTATTCAGACCATTCTCAAATGAAAGATTAATAAAAGCAATGCCAAAA ACTGTTAAAAAGGTTGCTGTTTTAGATAGAACTAAAGAACCAGGTGCTGCAGGAGAACCTCTATACTTAGAAGTTAAGAA TGCATTCTACGGATTAGAAAATGCTCCTGTAATAGTTGGTGGTAGATTCGGATTAGGATCAAAAGATACTGTACCAGCTG ATATCGTTGCTGTTTACGAAAACTTAAATAAAGAGGATGCTAAAAATGGATTCACTTTATCAATAGTTGATGACGTAACT AACACTTCATTAGAACCAGTTGGAGACATAGATACTACTCCAGAAGGAACTAAAGCTTGTAAGTTCTGGGGATTAGGATC AGACGGAACAGTTGGAGCTAACAAGAGTGCTATCAAAATCATCGGAGACCATACTGACATGTATGCTCAAGGATACTTTG CATATGACTCTAAAAAATCAGGTGGGGTTACAATTTCTCACTTAAGATTCGGTAAACAACCAATAAAATCACCTTACTTA ATAAACAAAGCTGATTTCGTTGCTTGTCATAACCAATCATATGTTAACAAATACTTCGTTTTAGATGGATTAAAGAAAAA CGGAACATTCTTATTAAACACTATCTGGACTCCAGAAGAAGTTGCTGAACATTTACCAGCAAGTTATAAGAGATTCTTAG CTGAAAACAACATTAAGTTCTATACTTTAAATGCTGTTAAGATAGCTCAAGAAGTTGGATTAGGTGGAAGAATCAACATG ATCATGCAATCAGCATTCTTCAAACTAGCTAACATAATACCAGTAGAAGACGCAGTTAAATACTTAAAAGATGCTGTTGT AACTTCATACGGTAAAAAAGGTGAAAAAGTTGTTAACATGAACCACGCTGCTATAGACAAAGGAATCGACGCTATCGTTG AAATCACTGTTCCAGCTGAGTGGGCTAACGCTAAAGATGAAGTTGTTGAAGCTAAAGAAGTTCCAGCATTCATCAAAAAC ATTGTTGAACCAATGAACAGATTAGAAGGAGATAAACTTCCTGTATCAGCATTCAACGGAATGGAAGATGGTACTTTCGA ACCAGGTACTGCTGCATACGAAAAGAGAGGAATCGGTATAAACATACCAGAATGGATAGCAGACAACTGTATCCAATGTA ACCAATGTGCTTACGTTTGTCCTCATGCTACAATAAGACCATTCTTATTAACTGAGGAAGAAGCTAAAAATGCTCCTGCT TCAACTAAGTTAGTTGCTGCTAAAGCATTAAAAACTGAAGAGCCAATGCAATTCACTATGGCTGTAAGTACTTTAGACTG TACTGGATGTGGAAACTGTGCTCAAGTTTGTCCTGCTAAGGAAAAAGCTTTAGTTATGAAACCACAACATACTCAAGAAG ATCAAATAGAAGCTTGGGATTACTGTGTAAATGATGTTGCACCTAAGAAAAACCCAATGAACAAAAACACAGTTAAAGGT AGCCAATTCGAGCAACCATTATTCGAGTTCTCAGGAGCTTGTGCTGGATGTGGAGAAACTCCATATGCTAAACTTATAAC TCAATTATTCGGAGATAGAATGATGATAGCTAACGCTACTGGATGTTCATCAATCTGGGGTGGATCAGCTCCTTCAACTC CATACACAACTAACCACAATGGTCATGGACCAGCTTGGGCTAACTCATTATTCGAGGACAACGCTGAATTCGGATTAGGT ATGTTCTTAGGAGTTAAAGCTATAAGAGAAAGATTAGTTGATCTTGCTGGAAAAGCAATTGAAGCTGGTGTTAAACCAGA AGCTAAAGAAGCTTTAGAAGCTTGGATAGCTGAAGTTGACAACGGAGAAGGAACTAGAGATAGAGCTGACGCTGTTGTAG CTGCATTACAAGGTGAAACTAACGAGTTCGCTAAAGAAATATTAAAAGATCAAGACTACTTAGCTAAGAGATCACAATGG ATCTTCGGTGGAGACGGATGGGCTTACGACATCGGTTACGGTGGAGTTGACCACGTTTTAGCTAGTGGAGAAGATGTAAA CATACTTGTTATGGATACAGAAATCTACTCAAATACTGGTGGTCAGGCTTCTAAATCAACTCCAACTGCTGCTATCGCTA AATTCGCTGCTGCAGGTAAGAGAACTAAGAAGAAAGATTTAGGAATGATGGCTATGAGCTATGGTTATGTATATGTTGCT CAAATAGCTATGGGTGCAGATAAGAACCAAACTCTTAAAGCTATAGCTGAAGCTGAAGCATACAAAGGACCATCATTAAT AATAGCTTACGCTCCATGTATCAGCCACGGATTAAAAGCTGGTATGGGTAACTCTCAATTAGAAGAGAAGAGAGCTGTTG AATGCGGATACTGGGCTATGTATAGATTCAACCCAATGTTAAAAGAAACTGGTAAGAATCCATTCTCATTAGACTCTAAA GAACCAACTGGTGATTTCAGAGAATTCATAATGGGAGAAGTTAGATACGCTGCATTAGCAAAAGCATTCCCAGAAGCTGC TGAAGCTTTATTCGAAAAGACTGAAAGAGATGCTAAAGAAAGATTAGAAAACTACAAAAAACTTGCTGCAAACTAG Protein sequence : MAMRKMKTMDGNTAAAYISYAFTDVAAIFPITPSSPMAEWVDENSARGLKNIFGQPVKVMEMQSEAGAAGAVHGSLQAGA LTTTYTASQGLLLMIPNMYKIAGELLPSVFHVSARALATSALNIFGDHQDVMAARQTGFAMLAEGSVQEVMDLSAVAHLA ALKARIPFVNFFDGFRTSHEIQKVELLQYDELKELVDMEAVEEFRRRALNPNKPVTRGTAQNPDIYFQEREAVNKFYDAV PEIVESYMKEITKLTGREYNCFDYYGAADAERVIVAMGSVTDLIEETVDYLNAKGEKVGLIKVRLFRPFSNERLIKAMPK TVKKVAVLDRTKEPGAAGEPLYLEVKNAFYGLENAPVIVGGRFGLGSKDTVPADIVAVYENLNKEDAKNGFTLSIVDDVT NTSLEPVGDIDTTPEGTKACKFWGLGSDGTVGANKSAIKIIGDHTDMYAQGYFAYDSKKSGGVTISHLRFGKQPIKSPYL INKADFVACHNQSYVNKYFVLDGLKKNGTFLLNTIWTPEEVAEHLPASYKRFLAENNIKFYTLNAVKIAQEVGLGGRINM IMQSAFFKLANIIPVEDAVKYLKDAVVTSYGKKGEKVVNMNHAAIDKGIDAIVEITVPAEWANAKDEVVEAKEVPAFIKN IVEPMNRLEGDKLPVSAFNGMEDGTFEPGTAAYEKRGIGINIPEWIADNCIQCNQCAYVCPHATIRPFLLTEEEAKNAPA STKLVAAKALKTEEPMQFTMAVSTLDCTGCGNCAQVCPAKEKALVMKPQHTQEDQIEAWDYCVNDVAPKKNPMNKNTVKG SQFEQPLFEFSGACAGCGETPYAKLITQLFGDRMMIANATGCSSIWGGSAPSTPYTTNHNGHGPAWANSLFEDNAEFGLG MFLGVKAIRERLVDLAGKAIEAGVKPEAKEALEAWIAEVDNGEGTRDRADAVVAALQGETNEFAKEILKDQDYLAKRSQW IFGGDGWAYDIGYGGVDHVLASGEDVNILVMDTEIYSNTGGQASKSTPTAAIAKFAAAGKRTKKKDLGMMAMSYGYVYVA QIAMGADKNQTLKAIAEAEAYKGPSLIIAYAPCISHGLKAGMGNSQLEEKRAVECGYWAMYRFNPMLKETGKNPFSLDSK EPTGDFREFIMGEVRYAALAKAFPEAAEALFEKTERDAKERLENYKKLAAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 59 |
