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Name : polA (CPF_2250) Accession : YP_696673.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 2496982 - 2499582 bp Length : 2601 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : ATGAAAAGATTATTGATATTAGACGGGAACAGTCTTTTAAATAGAGCCTTTTATGCTGTGCCTTTGCTTAGCAATAGTGA AGGAACTCATACAAATGCTATTTATGGTTTTACAAATATGCTTTTTAAGATGAGAGAGGATATAAAACCTGATTATATAG TTTGTACTTTTGATAAAAAAGCACCAACTTTTAGACATTTAGAGTATGGGGATTATAAGGCTGGAAGAAAGAAAATGCCT CCTGAGTTAGCAGAGCAGTTTCCTATTGTTAAGGAAATGCTAAAGTTATTTTCAATAACAACTTATGAATTAGATGGATT CGAAGCAGATGATATTATAGGAAGTTTAGCTAAGGTGGCTGAAGGTGAAGGAATCGAAGTTTATATTATGACTGGAGATA AGGATGCCCTTCAACTAGCAGCTAAGGATATAAATGTATGTATAACTAAGAAGGGTGTTTCTGAAATAGAAGTTTATAAC TATGATAGAATGGTTGAAGAATATGGAGTTACTCCTACTCAGTTCATAGATGTTAAAGGACTTATGGGAGATAAATCTGA TAATATTCCAGGGGTACCAGGAGTAGGAGAAAAAACAGCCTTTAAATTAATAAAAGAGTATGGTTCAGTAGAGGCAGTTT TAGAAAATATAGATAACATAAGTGGTAAAAAGTTAAAAGAAAATTTAACTGAGTACAGCGAACAGGCTATATTCTCTAAA AAGTTAGCTACTATTATGACTAATGTTCCTATAGATTTTGATTTAGATGAGATTAAATCAAAGGATGATTATAATAAAGA TCAGTTAAAAGCTTTATTTACAAAGCTTCAAATGAAATCTATATTAGATAAATTATCAAATGGGGAAGAAGAAGAGCCAG AAATAGAAGTTAAAATAACTAATATAGAAAATAGTAAAGAATTAGAAGAGTTATTTAAGAATATAAACGAAGAAGTATAT ATTAATTTTACTTATTTAAATAAAGAAAAGTATTCTACTATAGAGATTGATAAAATATTTATTAATTATGATGAGAAAAA TTATTTAATTAACTTTAAAGAGTTAGTAAAAGAAGAGGAGAATATTAAATCCTTTAAAGAATTTTTTGAGAATGAAGATA TATTAAAAAATGGCTATAGTATAAAAAATGCCTTAACAGCATTAAAAAAATTAGGAATAGATTTTAATGGATTAGCCTTT GATTGTGAATTAGCAGCATATTTAATAGATTCATCTAAGGGAGAATATACTCTTTTATCCTTAATAAATAACTATCTTTC AAAATTCCCTAATGTAAAAGAGGGGGAAGAAGACTTAGTTGGAATTTCATTTATGAAAGAGTTGACTTTAGTTCTAAAGA AAAAGATAGAAGAAGAGAAAATGGAAAGACTTATGTATGATATTGAGCTTCCTTTAGAAACAGTTTTATCTTCTATGGAA TCAATAGGGTTTAAAGTAAATAAAAATATTTTAGATGAGCTATCTATTAAGTTTAAAAGAGAGTTAGAGGAAACACAAAA AGAGATCTTTGAACTTGCAGATGAAGAGTTCAACATAAATTCTCCAAAACAATTAGGTAAGATATTATTTGAAAAATTAG ATTTACCAGTTATAAAGAAAACTAAAACTGGCTATTCAACTAACGCAGAAGTTTTAGAAAAGCTTAAGGACAAACATCCT ATAATAGAAAAAATAACATATTTTAGACAGCTTTCAAAAATATATTCAACTTATGTTGAAGGATTAAAGTCTGTTATAGA TACAGATGGTTCTATACATTCAACATTTAATCAAACTGTAACTACTACAGGTAGACTTTCATCAACAGAGCCTAATCTTC AAAATATACCTATAAAATACGAAATGGGTAGAGAAATAAGAAAGGTATTTATACCAAAAGAAGAAGGAGATTTATTAATA TCAGCTGACTACTCACAAATAGAACTTAGAGTTTTAGCTCATATTTCTGGTGATGAAAATATGATAGATGCATTTAATCA TCATTCAGATATACACACTAAGACTGCTTCTGAAGTATTTAAAGTTCCAGTTGAAGAGGTAACTCCATTAATGAGAAGTA GGGCTAAGGCAGTAAACTTTGGTATAGTATATGGAATAGGAGATTTTAGTCTTTCACAGGATTTAAATATTTCAAGAAAA GAAGCTAAAGAATATATGGATATATATTTTGAAAGATATCCAAAAATTAAAGAGTATATTTCTAAGGTTATTCATGAAGC TCAAACAAAGGGATATGTATTAACTATGTTAAATAGAAGAAGATATATACCTGAAGCAAATTCTTCAAATAAAATAGTAA AAGCCTTAGGAGAAAGACTTGCAATGAATGCTCCAATACAAGGAACAGCAGCAGATATAATAAAACTTGCTATGGTAAAT GTATATAACAAGTTAAAAGAATTAAATTTAAATAGTAAGTTAATATTACAGGTTCATGATGAACTTATAATAAATGTTGT AAAAGGAGAATTAGACATTGTTAAGAAACTTCTAAAAGAGGAAATGGAAAATACAATTAAATTAAGTGTACCATTAGATG TTGATGTTAATGTTGGAGAAGATTGGTATAAGTTAAAATAA Protein sequence : MKRLLILDGNSLLNRAFYAVPLLSNSEGTHTNAIYGFTNMLFKMREDIKPDYIVCTFDKKAPTFRHLEYGDYKAGRKKMP PELAEQFPIVKEMLKLFSITTYELDGFEADDIIGSLAKVAEGEGIEVYIMTGDKDALQLAAKDINVCITKKGVSEIEVYN YDRMVEEYGVTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEAVLENIDNISGKKLKENLTEYSEQAIFSK KLATIMTNVPIDFDLDEIKSKDDYNKDQLKALFTKLQMKSILDKLSNGEEEEPEIEVKITNIENSKELEELFKNINEEVY INFTYLNKEKYSTIEIDKIFINYDEKNYLINFKELVKEEENIKSFKEFFENEDILKNGYSIKNALTALKKLGIDFNGLAF DCELAAYLIDSSKGEYTLLSLINNYLSKFPNVKEGEEDLVGISFMKELTLVLKKKIEEEKMERLMYDIELPLETVLSSME SIGFKVNKNILDELSIKFKRELEETQKEIFELADEEFNINSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEKLKDKHP IIEKITYFRQLSKIYSTYVEGLKSVIDTDGSIHSTFNQTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFIPKEEGDLLI SADYSQIELRVLAHISGDENMIDAFNHHSDIHTKTASEVFKVPVEEVTPLMRSRAKAVNFGIVYGIGDFSLSQDLNISRK EAKEYMDIYFERYPKIKEYISKVIHEAQTKGYVLTMLNRRRYIPEANSSNKIVKALGERLAMNAPIQGTAADIIKLAMVN VYNKLKELNLNSKLILQVHDELIINVVKGELDIVKKLLKEEMENTIKLSVPLDVDVNVGEDWYKLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 4e-155 | 44 |
