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Name : potB (CPF_2224) Accession : YP_696648.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter permease PotB Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 2471834 - 2472679 bp Length : 846 bp Strand : + Note : identified by similarity to SP:P23860; match to protein family HMM PF00528 DNA sequence : ATGAAAAATAGAAATAAAAATTTATCATTTGCAGCTTATCCATACGTTGTATGGAGTGCTATATTCATAGTTATCCCTTT ACTTTTAATAGTTTTCTTTAGTTTTACAAGTAAAGTTGACGGAAGATTTGTTTTCTCTTTTGAAAACTTCCAAAGATTAT TTGAGCCAATATATTTTACTGTTTTTATACGTTCTATATGGCTTGCTGTTTTATCAACAGTTTCATGTTTAATTTTAGGT TATCCAATAGCTTATATAATTTCTAAATTACCTATAAAAAGAAGAAATATGTTAATACTTTTATTCATATTACCAATGTG GATGAACTTCTTACTTAGAACATATGCGTGGATGGCTATACTTGGTAGAGATGGACTTATTAATACTCTTTTAGGTTATA TAGGAATAGGTCCAATTAAAATGCTATATACTGACGGAGCAATCTTACTTGGAATGGTATATAACTTCTTACCATTTATG GTTATACCAATATATACTGTACTTATAAAAATTGATAAAAACTTAGTTAATGCAGCTTATGACTTAGGTGCAAATAAAGC TCAAGCTTTTAGAAAAATTATTTTACCACTTAGTATTCCTGGAATAATCTCTGGAATAACTATGGTATTTATGCCAGCTG TTTCAAACTTCGTAATCCCAAGCCTTCTAGGTGGTGGAAAATACATGTTAGTTGGTAACCTTATAGAACAACAATTTACT ACTATTGGTAACTGGAACTTTGGTTCTGCTTTATCAATCTTTATGATGATATTAATATTAATTTCAATGGCCTTTATGTC TAAATATGAAAAGAACGGAAAAGAAGGAGGTAAACAGCTATGGTAA Protein sequence : MKNRNKNLSFAAYPYVVWSAIFIVIPLLLIVFFSFTSKVDGRFVFSFENFQRLFEPIYFTVFIRSIWLAVLSTVSCLILG YPIAYIISKLPIKRRNMLILLFILPMWMNFLLRTYAWMAILGRDGLINTLLGYIGIGPIKMLYTDGAILLGMVYNFLPFM VIPIYTVLIKIDKNLVNAAYDLGANKAQAFRKIILPLSIPGIISGITMVFMPAVSNFVIPSLLGGGKYMLVGNLIEQQFT TIGNWNFGSALSIFMMILILISMAFMSKYEKNGKEGGKQLW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 2e-36 | 45 |
