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Name : pdp (CPF_2062) Accession : YP_696491.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2301785 - 2303086 bp Length : 1302 bp Strand : - Note : identified by similarity to SP:P39142; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGTATGATTTAATATTAAAAAAGAGAAATGGTGGGGAATTAAGCACTGAAGAAATAAACTTTTTTGTTGATAA ATATACAAATGGTGAAATACCAGATTATCAAGTAGCAGCCTTATTAATGGCTATATATTTCCAAAAAATGAATAAGAGAG AAACTTCAGATTTAACTATGGCTATGGTTAATTCAGGAGATATATTAGATTTAAGTGAAATACACGGTATAAAAGTAGAT AAGCATTCAACTGGTGGGGTTGGTGATACTACTACTTTAGTTTTAGGACCTATGGTTGCAGCTTTAGGAATTCCTGTAGC TAAAATGTCAGGAAGAGGTCTTGGACATACTGGTGGAACAATAGATAAATTAGAAAGTTTTGATGGATTCTCAGTAGAAA TGACTAAGGATCAATTTATAAATAATGTTAATAATATAAAATTAGCAGTTGGTGGACAAACAGGAGATTTAGCTCCAGCT GATAAAAAACTTTATGCTTTAAGAGATGTTACTGGAACTGTTGATAATGTATCATTAATAGCTTCAAGTATTATGAGTAA AAAAATTGCTGCAGGCGCTGATGCCATAGTATTAGACGTTAAGGTTGGAGATGGAGCATTTATGAAAACTCCAGAGGCAG CTAGAGAACTTGCAACTGAAATGGTTGGAATAGGTAAACATGTTGGAAGAAATACTGTTGCCATAATTTCAGATATGGAT CAACCTTTAGGATTTGCTATAGGTAATGCATTAGAAGTTAAAGAAGCCATAGAAACTTTAAGAGGAAATGGTCCTAAGGA TCTTTTAGAGCTTTGCTTAACACTTGGAAGCAACATGGTTGTTTTAGCAGGTGCTGCTAAAGATACTGATGAAGCAAGAA AAATGTTAATGGAAACAATAACTTCAGGAAAAGCAATTGAAAAATTAAAAGAATTTGTAAAAGCTCAAGGTGGAGATGCA TCAGTTATTGATGATATATCAAACTTCCATAATGCTAAATATGTAATTCCAGTTAAAGCTAATAAATCAGGGGTTGTAAG CAAAATACATGCTGAAAACATAGGATTAGTTGCTATGGAACTTGGAGCAGGAAGAGCTACTAAAGAAAGTATTATAGATT TAGCTGTTGGTATTGTTCTTCAAAAGAAAAGAGGAGACAAAGTTAATGAAGGAGATATAATAGCATATATTCATGCTGAT GATGAAGAAAAAGGTAAGAAAGCAGTAGATGGAATATTAGCTAATTACGAAATATCAGATTCAGTAAAAGATATTCCATT AATATATGATATAGTTAAATAG Protein sequence : MRMYDLILKKRNGGELSTEEINFFVDKYTNGEIPDYQVAALLMAIYFQKMNKRETSDLTMAMVNSGDILDLSEIHGIKVD KHSTGGVGDTTTLVLGPMVAALGIPVAKMSGRGLGHTGGTIDKLESFDGFSVEMTKDQFINNVNNIKLAVGGQTGDLAPA DKKLYALRDVTGTVDNVSLIASSIMSKKIAAGADAIVLDVKVGDGAFMKTPEAARELATEMVGIGKHVGRNTVAIISDMD QPLGFAIGNALEVKEAIETLRGNGPKDLLELCLTLGSNMVVLAGAAKDTDEARKMLMETITSGKAIEKLKEFVKAQGGDA SVIDDISNFHNAKYVIPVKANKSGVVSKIHAENIGLVAMELGAGRATKESIIDLAVGIVLQKKRGDKVNEGDIIAYIHAD DEEKGKKAVDGILANYEISDSVKDIPLIYDIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-73 | 47 |
