Gene Information

Name : argF (CPF_0162)
Accession : YP_694626.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 192972 - 193967 bp
Length : 996 bp
Strand : +
Note : catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation

DNA sequence :
ATGGCAGTTAACTTAAAAGGAAGAAGCTTTTTAACATTAAAAGACTTTACACCAGCAGAAATAAGATATTTATTAGATCT
TTCTCATGATTTAAAGGCTAAAAAGAGAGCTGGAATATTAGGAGATAGCTTAAAAGGTAAAAATGTAGTTTTACTATTTG
AAAAAACTTCAACTAGAACAAGATGTGCTTTTGAATGTGGAGCTGCTGAAGAAGGTGCTCATGTAACATTCTTAACTAAC
TCACAAATGGGTAAAAAAGAATCAATAGAAGACACTGCTAAGGTTCTTGGAAGAATGTATGATGGTATTGAATTTAGAGG
ATTCAAACAATCAACTGTTGAAGAATTAGCTAAACATGCAGGTGTTCCAGTATGGAATGGATTAACTGACGCTGACCATC
CAACTCAAATATTAGCAGACTTCTTAACAATAGAAGAACATGCACATAAACCATTAAGTGAAATCAAATTAGTATTTACT
GGTGATACAAGAAACAATATGAGTTATGCATTAATGTATGGTGCAGCTAAAATGGGAATGCACTTTGTAGCTCTTGGACC
AGATAGCTTAAAACCAGATGAAGATATTCTTAAAGAAATGCAAGAATACTCAAAAGAAACTGGTGCAACTATAGAATTTA
GTTCAAATGTTGATGAAGCAGTTAAGGGTGCAGATGTTATCTACACTGATATCTGGGTATCAATGGGTGAAGATGAAAGC
TTATATCCAGAAAGAGTTAAATTATTAACTCCATACAAAGTTACTAGAGAAATGATGAATAAAACAGGAAATAAGAATAC
TTTATTCATGCACTGCCTACCATCATTCCATGATGAAGATACAGAAGTATGTAAAGATATGATGGATAGATTAGGTCTTG
ATATAAGAGAAGTTGAAGATGAAGTATTTAGAAGTAAAAATTCAGTTGTATTTGATGAAGCTGAAAACAGAATGCATACA
ATCAAAGCAGTAATGGTAGCAACTGCTGGAAGATAA

Protein sequence :
MAVNLKGRSFLTLKDFTPAEIRYLLDLSHDLKAKKRAGILGDSLKGKNVVLLFEKTSTRTRCAFECGAAEEGAHVTFLTN
SQMGKKESIEDTAKVLGRMYDGIEFRGFKQSTVEELAKHAGVPVWNGLTDADHPTQILADFLTIEEHAHKPLSEIKLVFT
GDTRNNMSYALMYGAAKMGMHFVALGPDSLKPDEDILKEMQEYSKETGATIEFSSNVDEAVKGADVIYTDIWVSMGEDES
LYPERVKLLTPYKVTREMMNKTGNKNTLFMHCLPSFHDEDTEVCKDMMDRLGLDIREVEDEVFRSKNSVVFDEAENRMHT
IKAVMVATAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-86 60
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-83 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-83 58
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-83 58
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-83 58
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-83 58
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-83 58