Gene Information

Name : hemC (CPF_1688)
Accession : YP_696126.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1910677 - 1911552 bp
Length : 876 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGGAATTAATAATAGCGACTAGAAAAAGTAAGTTAGCACAAGTGCAAACTGAAAAAGTTATGGAACTTTTAAAGGAAAA
AGAAAATGTAGATAGTAAGAAGCTTTTAGTTATGACAGAAGGTGATAGAAGACTAGATGTTTCATTAAATAAAATAGGTG
GCAAGGGTCTATTTGTAAAGGAAATAGAATTAGCTCTTTTAAATAAAGAAGCTCATGGAGCAGTTCATAGTATGAAAGAT
GTTCCTTTTGAACTTCCTAGTGAATTTGAGCTTGTTGCAATGCCAGAGAGAGAAGATATAAGAGATGCCTTTGTATCTTT
AAATGGATCAACTTTATCTAACTTAAGAAAAGGAGCTAGAATCGGAACTAGCAGTATAAGACGTGCAGAGCAGTTAAAGT
TATTTAGAGATGACTTAGAGATTGTTCCAATTAGAGGTAATGTTCAAACTAGAATAAAAAAAATAACTGAAGAAAATTTA
GATGGAATAATTTTAGCGGCAGCAGGATTAAAAAGACTTGGTATGGAAGATGTAATAAGTGATTATTTTGATCCAAAGGT
ATTTTTACCTGCTATTGGTCAAGGAGCTTTAGGAATAGAGTGCTTAAAAGGTGGAGAATTTAATGACTATTTTAAAGCTT
TAGATAGCAAAGAGGTTAGAACTACTGTTGAGGCTGAAAGAAGTTTTATGAAGGTATTAAACGGAGGATGTCATAGTCTT
ATAGGTGCTTATTCAGAGGTTAAAGATAATGACTTATATATGATAGGTACATTTACTGTAAATAATAGAATAGTTAAAAA
AGATATATTAGGAAATAAAGAAGATAATATATTATTAGGAAAAAAACTTGCAGAAAAAATATTAGGAGAGGTATAG

Protein sequence :
MELIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVMTEGDRRLDVSLNKIGGKGLFVKEIELALLNKEAHGAVHSMKD
VPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENL
DGIILAAAGLKRLGMEDVISDYFDPKVFLPAIGQGALGIECLKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL
IGAYSEVKDNDLYMIGTFTVNNRIVKKDILGNKEDNILLGKKLAEKILGEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-44 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-44 43