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Name : CPF_0156 (CPF_0156) Accession : YP_694620.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Virulence Product : perfringolysin O Function : - COG functional category : - COG ID : - EC number : - Position : 184140 - 185642 bp Length : 1503 bp Strand : + Note : identified by similarity to SP:P19995; match to protein family HMM PF01289 DNA sequence : ATGATAAGATTTAAGAAAACAAAATTAATAGCAAGTATTGCAATGGCTTTATGTCTGTTTTCTCAACCAGTAATCAGTTT CTCAAAGGATATAACAGATAAAAATCAAAGTATTGATTCTGGAATATCAAGTTTAAGTTACAATAGAAATGAAGTTTTAG CTAGTAATGGAGATAAAATTGAAAGCTTTGTTCCAAAGGAAGGTAAAAAAGCTGGTAATAAATTTATAGTTGTAGAACGT CAAAAAAGATCCCTTACAACATCACCAGTAGATATATCAATAATTGATTCTGTAAATGACCGTACATATCCAGGAGCATT ACAACTTGCAGATAAAGCATTTGTGGAAAATAGACCTACAATCTTAATGGTAAAAAGAAAGCCTATTAACATTAATATAG ATTTACCAGGATTAAAGGGCGAAAATAGTATAAAGGTTGATGATCCAACCTATGGAAAAGTTTCTGGAGCAATTGATGAA TTAGTATCTAAGTGGAATGAAAAGTATTCATCTACACATACTTTACCAGCAAGAACTCAATATTCAGAATCTATGGTTTA TAGTAAATCACAAATATCAAGTGCCCTTAATGTTAATGCTAAAGTCCTTGAAAACTCACTTGGAGTAGACTTTAATGCAG TAGCAAACAATGAGAAAAAAGTTATGATTTTAGCATATAAACAAATATTCTATACAGTAAGTGCAGATTTACCTAAGAAT CCATCAGATCTTTTTGATGACAGTGTTACATTTAATGATTTAAAACAAAAGGGAGTAAGTAATGAAGCACCTCCACTTAT GGTTTCAAATGTAGCTTATGGAAGAACAATATATGTTAAGTTAGAAACTACTTCTAGTAGTAAAGATGTACAAGCTGCTT TCAAAGCTCTTATAAAGAACACTGATATAAAAAATAGTCAACAATATAAAGATATTTATGAAAATAGTTCCTTCACAGCA GTAGTTTTAGGAGGAGATGCACAAGAACATAACAAAGTTGTAACTAAAGACTTTGATGAAATAAGAAAAGTAATTAAAGA CAATGCAACTTTTAGTACAAAAAACCCAGCATATCCAATATCTTATACTAGTGTTTTCTTAAAAGATAACTCAGTTGCTG CTGTTCACAATAAAACAGATTATATAGAAACAACTTCTACAGAGTATTCTAAGGGAAAAATAAACTTAGATCATAGTGGA GCCTATGTTGCACAGTTTGAAGTAGCCTGGGATGAAGTTTCATATGACAAAGAAGGAAATGAAGTTTTAACTCATAAAAC ATGGGATGGAAATTATCAAGATAAAACAGCTCACTATTCAACAGTAATACCTCTTGAAGCTAATGCAAGAAATATAAGAA TAAAAGCAAGAGAGTGTACAGGCCTTGCTTGGGAATGGTGGAGAGATGTTATAAGTGAATATGATGTTCCATTAACAAAT AATATAAATGTTTCAATATGGGGAACAACTTTATACCCTGGATCTAGTATTACTTACAATTAA Protein sequence : MIRFKKTKLIASIAMALCLFSQPVISFSKDITDKNQSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVER QKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDE LVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKN PSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTA VVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSG AYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTN NINVSIWGTTLYPGSSITYN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| slo | YP_281505.1 | streptolysin O | Virulence | Not named | Protein | 5e-156 | 67 |
| hly | AAA69525.1 | listeriolysin O | Virulence | LIPI-1 | Protein | 4e-104 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPF_0156 | YP_694620.1 | perfringolysin O | VFG2275 | Protein | 0.0 | 99 |
| CPF_0156 | YP_694620.1 | perfringolysin O | VFG0976 | Protein | 2e-156 | 67 |
| CPF_0156 | YP_694620.1 | perfringolysin O | VFG1363 | Protein | 3e-110 | 47 |
| CPF_0156 | YP_694620.1 | perfringolysin O | VFG0074 | Protein | 2e-104 | 44 |
