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Name : CPF_1242 (CPF_1242) Accession : YP_695688.1 Strain : Clostridium perfringens ATCC 13124 Genome accession: NC_008261 Putative virulence/resistance : Unknown Product : dicarboxylate transporter Function : - COG functional category : S : Function unknown COG ID : COG1288 EC number : - Position : 1413590 - 1415098 bp Length : 1509 bp Strand : - Note : identified by match to protein family HMM PF03600; match to protein family HMM PF03606 DNA sequence : ATGAGTAAAAAGAAAAAAATTTCGTTCCCTACAGCCTTTACTGTATTATTTATTGTTTTAATTTTATCAGCTGTTTTAAC TTATGTGATTCCAGCAGGATCATATTCAAAGTTGTCTTATAATGAAGCTGAAAATACCTTTATTGTTACAAATCCTCAAG GGGAAAGCACTAAGGAAGCTGCAACCCAAAATACCTTAGATAAACTTGGTATAAAAATAGACTTAAGTAAATTTACTGAT GGAAGTATAAATAAGCCAATAGCTATACCAAATACTTATGAAAAGGTTGCTCAAAATCCTCAAGGTATTGCTCAAATAAT AGAAGCTCCTATTCAAGGAACTTATGACACTATAGATATAATTATGTTCGTTTTAATAATTGGTGGAGTAATAGGAGTTT TAAATACAACTGGAGCATTTAATGCTGGAATTGCTAGCCTTTCTAAAATAACTAAGGGAAAAGAATATATACTTATAATA TTATTATCAATACTTATTTCTCTTGGTGGTACTACTTTTGGATTGGCAGAAGAAACAATTGCTCTTTATCCAATTCTGCT CCCAATCTTCCTAGCTTCTGGCTATGATGCTATAGTTTGTATAGCCACAATATACATGGGTTCATCTATAGGAACAATGT TCTCAACTGTAAACCCATTCTCTTCAGTAATAGCTTCAACAGCTGCTGGAATAAGCTTTAAAGAAGGCCTTGATTTTAGG ATGATAGGATTAGTTTTAGCTACACTTATAACAATAATTTATATACTTAGATATGCTAAAAAAGTTAAAAACGATCCTTC TAAATCCCTTGTATATGATCAAAAAGATGAAATAGATTCTAAATTCCTTCATGAATCTAGTAATGATGTGCCAGTATTTA CTTGGAGACTTAAACTTATGCTTTTAATCTTCGCTGGTTCATTTATAATTTTAGTTTATGGAGTTTCAGCTAAAGGATGG GGATTTATACAAATGACTGCTCTATTCCTTGTAGTTGGAATAATTTTAGGATTCCTTTCAGGACTTGGAGAAAAGAAATT TGTTAATACCTTTATAGCTGGTGCTGCTGATTTAGTAGGAGTTGCCTTAGTTATAGGTGTTGCAAGATCTATAAACTTAA TACTTGAAAATGGTAAAATATCAGATACTTTACTTTATGTATCCTCAAATGGAATTCAAGGTATGGATAAAAATATATTT ATAATATTAATGCTTGTTATATTCATAATCTTAGGATTCTTTATTCCATCTTCATCTGGTCTTGCTGTTTTATCAATTCC AATAATGGCACCACTTGCAGATACAGTTGGTTTACCAAGGGATGTTATAGTTAGTGCTTACCAATTTGGTCAAGGATTAA TCTCCTTTATAACTCCAACAGGATTAATTTTAGCTACCCTTGCTATGGTTGATGTAACCTATAATAAATGGCTGAAATTT ATTATGCCTTTAATGGGAATTATAGCAGCCTTTGCAGCCTTACTATTATTAGTACAGGTACACTTTTAA Protein sequence : MSKKKKISFPTAFTVLFIVLILSAVLTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEAATQNTLDKLGIKIDLSKFTD GSINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDIIMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILII LLSILISLGGTTFGLAEETIALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLMLLIFAGSFIILVYGVSAKGW GFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVGVALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIF IILMLVIFIILGFFIPSSSGLAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF IMPLMGIIAAFAALLLLVQVHF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW1052 | NP_645869.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 5e-97 | 48 |
| SACOL1183 | YP_186046.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-97 | 48 |
| SAUSA300_1064 | YP_493762.1 | TRAP family protein | Not tested | vSa¥ã | Protein | 4e-97 | 48 |
| SAV1171 | NP_371695.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 2e-96 | 48 |
| SA1014 | NP_374287.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 2e-96 | 48 |
| SAKOR_01092 | YP_008491280.1 | Arginine/ornithine antiporter | Not tested | vSa¥ã | Protein | 6e-97 | 48 |
